Spathaspora passalidarum: SPAPADRAFT_51842
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Entry
SPAPADRAFT_51842 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_51842
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAPADRAFT_51842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP214
DUF16
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
18871600
NCBI-ProteinID:
XP_007376653
JGI:
51842
UniProt:
G3AS26
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MLVEEIISQDLGFKLDTPEHEIPLFDTPIDLSAHGSQDLNLLAVNNDLRLLAVSNISQLK
LVSLDKLDKSTSIGDALSITQVHFNSSRLLVVNTSRIQTLSVSSYQIGDVAHLEYYPHLN
KDIKSILPSPYTDSFLSLTVDNELYLCDDKSSTLIASNVSSYCWKQDGSYIYALNNDTTT
LAGKSIEFDDPPSEDSHIVSMFPFNQYLLVTYDITSDDFEHDIKSYVFEDKPDYYIPMDV
DTAPPFGMVERTATYYTSTINEWVESYSYSFITSSLATELSILSLSGHTLELIGYSEDIY
RAQFPMNEETDDDCSPVGIGISLELSKEVAEPCPGVDSVTGKLPKVYILLDTGKLISYWV
FHKHGLINDEVSLQRVIDYEKKLKSNAKPVASAPSIKPVSNEPSKGNEATTVQPENPFGS
AENPFGSSGANPFGSSSANAFKPSTTSPATGFGGFGQKSDNFGSTGFGQAKPEGFGAAAT
SGAFGGSNFGKSLTGGAFGNQTKTSDTASPFGNQTTTIPGKQNTTNPLSGPTTFGSTSFG
QPSSFTTHGFDNMTKTPQAAKNTAHSNFAKFSSSAASFGSGKTDIFSQSTDSPFGKLNEK
PASSPFGKLNEQAGNSPFGKLNEQSTNSPFGKLNEQPANSPFAKLTKEEGPSDIFAQKDA
PKEDAKKSAFGNFSGSKSIFEQPSQEDKPIESKPKSVFNPVSFAPETKKDQPTFESSEKL
SSPGFSNFGKLSLASEEVKSLASPFAKLTQNAPVETQSEDVSDFSEETEEEEEISEEGES
EELSEEGESEEIGQSIDLISQMKLKSESVIELPKKQPTIPSKSKLALSNDVLSTSEEEAE
TPEEINAPVEPIEFLVFDGLTRPTPKQGNVIGDEISRLVNITQGNLSVLKANIQLLGQFI
QDHDSPTSADLSDVQRISQRDLLTPTIEKLVDPLHVLKSDLSKQLGQVDELSTQVQKCLY
EKVKLDKLYSRLALLDTDNTKSHALKHRPLDIQNELMQMNLREKLAHVKTLESKLYSLIM
PIKAVNSLNSETLNNIEQVVFQINSQIQNQRESIDKLEEEIKKLEVDDNKVELPQLTSSP
RLKLVQRLRRTQPSSTAVKFMNQ
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgttagttgaggaaatcatctcacaagatttagggtttaaattagatacacctgaacat
gaaattccactatttgacactccgattgatttatcagcccatggtagtcaagatttaaac
cttcttgctgtgaataatgacttaagattattggcagtatctaatatatcacaattgaag
ttagtatcattagataagcttgacaaatcaacatccataggtgatgcactttcaattaca
caagttcattttaatagctccagattacttgtggttaacacactgagaattcaaacattg
tcagtatcatcctaccaaattggtgatgttgcccatcttgaatattaccctcatttaaac
aaggatattaaaagtatattgccgtcgccttatactgattcatttttgagtttgactgtt
gacaacgaattatacttgtgtgacgataaatcaagtactttaattgcatccaatgtctcc
agttattgttggaaacaagatggatcatacatatatgcattaaacaatgataccactacc
ttagctggtaaatcaattgaatttgatgacccaccactggaagactcacacattgtaagc
atgttcccattcaaccaatatcttttagttacttacgacatcaccctggatgattttgaa
catgatataaagtcatatgtttttgaagataaaccggactattacattcctatggatgtt
gatactgctcccccctttggaatggtggaaagaactgccacatattatacgtccaccatt
aatgaatgggttgaatcatacctgtattctttcattacttcgtccttagctaccgaatta
agcatattgagtttatcagggcataccttggaactaattggatactcagaagatatttat
cgtgcccagtttcccatgaatgaagaaaccgatgacgattgttcaccagtagggattggt
atttccttggaattgtctaaagaagtggctgagccatgcccaggagttgattcggttact
ggcaagttgcctaaggtgtacattcttttggataccggaaagctaatatcctattgggta
tttcataaacatggtttgataaatgacgaggtgtcattacaaagagtaattgattatgaa
aagaaattgaaaagtaatgcgaagccagttgcgagtgcgccatctataaaaccagtttct
aatgaaccatctaaaggtaatgaagccactactgttcaaccggaaaatcctttcggttct
gctgaaaacccattcgggtcatcgggtgcaaacccatttggatcttcctctgccaatgca
tttaaaccttccaccacttcaccagcaactggatttggtgggtttggtcaaaaatccgat
aattttggaagtactggttttggccaagctaaaccagagggtttcggggctgctgctacc
agtggtgcttttggaggcagtaactttggcaagagtttaactggtggggcatttggaaat
caaacaaagactagtgacaccgcatcaccatttggaaatcaaactaccaccattcctgga
aaacagaatactacgaaccctttatctggacccaccacatttggatccactagttttggt
caaccaagttcattcacaactcatggatttgataatatgactaaaactcctcaagcagca
aagaataccgcccattctaactttgctaagttttcttcttctgcagcatcatttggatca
ggtaagacagatatcttttctcaatcaacagattctccatttggtaagctaaatgagaaa
ccggcaagctctccatttggtaagctaaatgagcaagcgggaaactctccatttggtaag
ctaaatgagcaactgacaaactctccatttggtaagctaaatgagcaaccggcaaactct
ccatttgccaaattaacaaaggaagaggggcctagtgatatatttgctcaaaaggatgca
cctaaagaggatgccaagaagtctgcttttggcaatttctcgggatcgaagagcattttt
gaacaaccaagtcaagaagataaacctatagaatcaaaaccaaagagtgtctttaatcca
gtttcatttgctccagagacaaagaaggatcaaccaacattcgagagctcagaaaaactt
tccagtccagggttctctaattttggtaaattatcattagccagtgaagaagttaaatca
ttagcatcaccatttgctaaattaacacagaatgccccagtggaaacacaaagtgaggat
gttagtgatttttcagaggaaaccgaagaagaggaagaaatatccgaagaaggcgaatca
gaagaattatccgaagaaggtgaatcagaagaaattggacaatcaattgatttgatttct
caaatgaaattaaagtccgaatcagtaattgaattacccaagaaacaaccaacaatccct
tcaaaatcaaaacttgcattgtccaatgatgtattatcaactagcgaagaagaagccgag
acgcccgaagaaatcaacgctccagttgaaccaatcgagttccttgtgtttgatggattg
actcgtcctactccaaaacagggaaatgtcattggtgatgaaatttcacgattagtcaat
attactcaaggcaatttatcagtgttgaaagccaatattcaattgcttggacaattcata
caagatcacgactctccaactagtgctgatttgtctgatgttcaacgaatttctcaaaga
gatttgttgactccaacaattgaaaaattagtcgatccattacatgtattaaagctggat
ttatccaagcaattgggccaagttgatgaattatctacccaagttcaaaaatgtttgtat
gagaaagttaaacttgataaactttacagtagattggcattattggatactgacaatacc
aagagccacgcactcaagcatcgaccattggatattcaaaacgagttgatgcaaatgaat
ttacgggagaagttagcccatgtgaaaacattggaatcgaaattatactcattgatcatg
ccaatcaaggctgtgaattcattaaacagtgaaacgttgaacaatattgaacaagttgta
ttccaaatcaattctcaaattcaaaaccaacgcgaatcaattgataaattagaggaagag
attaagaagttggaagttgatgataataaagttgaattgcctcaattgacttcatctccg
agattgaaattagtacaaagattaagacgcacccaaccttctagtactgcagttaagttt
atgaatcagtag
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integrated database retrieval system