Spathaspora passalidarum: SPAPADRAFT_51949
Help
Entry
SPAPADRAFT_51949 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_51949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_51949
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAPADRAFT_51949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
HIP1_clath_bdg
ADIP
Band_7_C
Motif
Other DBs
NCBI-GeneID:
18871612
NCBI-ProteinID:
XP_007376775
JGI:
51949
UniProt:
G3ASW0
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MSGHNSPIEKHSEAPIDQTPDQPQQAVVETTTNEQTVSVVEPTEEPVADQPVVDAAAVAA
SVPDISIAEVGDDSVIQEEPHTSFSQIPSDKQQFTTPSRFLPPLKDIDKIVTPKSFHVAK
DAAHPGDSSVVNSSPIKNLVSEHDVTSGDIDDHFDEDGLRAVARYLSIDDSSIRAISGNS
EIISALISKSSEFQELVSQNEFIKLQLEQNIRSSAKQIESLQEKFSKADNTASLVQEENQ
ALKSKTIQQEHRIQELEDISSINNEHLARLKQIEEEKNLEIKKVREERDTQELENQQTIN
QLSGTNIEQSKKLNELTKEINETRNDKFTLQLELAKSQNELSYLRDQKEWFDDELKSVQG
RFTDLIKKHESEYLVTNSKIATLTARNETLETLNSQNQSTISSLKTKLEQEITKNSKIQT
DIELEKSRFLKELASKDELISLTKLQSEQRHTRIQQLESYAEEIKSSLGETVDKLEQELS
ERTEKVIELQEKLKRTEEVLDAELHKETDLPKLTESSAIIATNGISLSKLYSEYNHLKKQ
LVLERSQKQKMELQLEAFVNELESKKPALANYRDQVLFYEASLKEMIGKVETVRSEKTEV
EKDAKRLRSRIVETENEMVSMKKLLKDLGRQLCYYLIHSKIRDNHEDPLTLSEKNAIEKI
LAQTGNFDETMETDSDRLISDRLVEFRNIIELRQRNEELLVSIRQLSKQLESREEENNNL
ESVAIEEAKDAILTLESELDSLNVKLDAVTKERDALKVITEQPSSSNAEARYLNQVNEDL
RKKINESERIMADLKEQSSKTVRDLSEKLREVTDKKNEIALQVTASRQSAELAESRLANA
NKSLDDSHQELKQIRKEIQFWQQQANKQESLLVNKTQELRDLESTISQNRVLINTLEREK
AFSDTMQKALQNEIDTLKADKIKLNEFVLNLQSLLKDREESSKQLSAKLNASVENYQSLQ
QKLSEKEERVLILTSQSELAFKAQNAKLEQVNEISQQLLETRTKLSEKERLVDELRRKIE
SLKVHPAPAAAASTIPVSTHPSTASQDFEVNQLKEDLRIAEQQVDELSNLAKASETALVN
ATNSFEQYKVEADAKYQSLVKEKEYVEAEVKRLTELSNTTSQELEAIKSTHVEEVNDLKS
KLNEFKFKADRYDNLERDYQAKVVSIRKDLETHINVYNDVQNKYKSEMTKNTLLGSQIET
LKNEVESKGNEIKQLNDELQAVKESLQLKQESLTSEKSQLETELSISNNKIVELKEQNDL
LLNQLELTKGSSTGEEELGGDFRQVVSYLRHEKETSEAKLLVAVEENQALKVNLEKLQYE
LSIANSALSNANQINLDVNLKEQAELSSQLEQLHILKESNSTLRQENSKKSEEIEKLNNK
LVSMTNELEPLRSKVNELSTQIEFEKQQASLLSEENGRLKSTTAQSDSATVISLRERLKE
ITQQANAKITSLNEKIKAYQTEIAQLKSGLEDTAEKASSPEEIEKVKQEIESTKQELASA
KSEIEDLNNKLKAAKQDSNKYINTLTQEKNNLVIQLSTKQAELREQFNQEKEQLRKSLKE
EFEKQAGSSVANEEEAQKKYQELEQSVNKRKEELEKEYQEKLSSNADSTKEIAELNAKFE
RKLEEEKASVKAQIEKMFEVKIKMLNKKVERLEKQTGNAPPASLPVVPNATAPAPAIVSA
KPAVAASESASATVANAAAAAAAAAQQNQPGSSKFLGYPFTESTLTVHRPTVEKPEAKKF
SPTPNPVGQDGKKRTNQGQQQNPPFKKRDHH
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggcacaattcacctattgagaaacattccgaagctccgattgatcaaaccccc
gatcaaccacaacaggcggtagttgaaaccaccaccaacgaacaaaccgtttcagttgtg
gaaccaactgaggaaccagtggcagaccaaccagtggtggatgcagcagcagtagcagct
tccgttccagatatatctattgccgaagttggagatgatctggtgattcaggaagagcca
catacctcgtttctgcaaatcccatcagataaacagcaattcacaactccatcgcgattc
ttgccaccattgaaagatattgacaagattgtcacccctaaatcattccatgttgccaaa
gatgcagcacaccctggtgacctgtcagtggtcaatagttcacctatcaagaatcttgtt
tcggaacatgatgtcactagcggggatatcgatgatcattttgatgaagatggtttgcga
gcagttgctagatatttatcaatagatgattcatctatacgagcgatctcgggtaatagt
gaaatcattagtgctttaatatccaagtcgagcgaatttcaagaattggtatcccagaat
gaattcattaaattacagttggaacagaatatccgtagcagtgctaaacaaattgaatcc
ttgcaggaaaagttctccaaggctgataacactgcatcattagtacaggaagaaaaccaa
gcgttaaaatctaaaaccatacaacaagaacacagaatccaagaattggaagatatctcc
tcaatcaataatgaacaccttgcccgtcttaaacagattgaagaagagaaaaatttggaa
attaagaaggtgagagaagaacgggatacccaagaacttgagaatcaacaaactatcaat
caattatcaggaactaatattgaacagagcaagaaactcaatgaattgaccaaggagatc
aatgaaaccagaaatgataagtttacacttcagttggaattagccaagtctcagaatgaa
ctttcataccttcgcgatcaaaaagaatggtttgatgatgaattgaaatcagttcaaggc
agatttaccgacttaatcaagaagcacgaatcggaatatttggtcactaactcaaaaatc
gccactttgacggcaagaaatgaaacccttgaaactttgaacagtcaaaaccaatctacc
attagctcactcaagactaaattggaacaggaaattacgaaaaattccaagattcaaact
gatattgagttggaaaagtcaaggttcttaaaagagttggcttccaaggatgagttaata
tcattaacaaagctccaatccgaacaacgtcacactcgtattcaacaattagaatcatat
gctgaagaaatcaaatcatcattgggtgaaaccgttgataagcttgaacaggaattatca
gaaaggaccgaaaaagttatagaattacaagaaaagttaaagagaaccgaagaagtattg
gatgcagaattacacaaggaaaccgatttacctaaattgaccgagtcttctgctataatt
gccaccaatggaatttccttatcgaaattatactcggaatataatcatttgaagaaacaa
ttggttttggagagatctcaaaagcaaaaaatggaacttcaattggaggcatttgttaat
gaattagaatctaaaaagccggcattggccaattatcgtgatcaagtattgttctacgaa
gcttcattaaaggaaatgattggtaaagtggaaaccgtcaggtctgaaaagacagaagtc
gaaaaggatgcaaagagattaagatcgagaatcgttgaaactgaaaatgaaatggtcagc
atgaagaaattgctcaaagatttaggccgtcaattatgttactatttgatccattccaag
attagagataaccatgaagatccattgacattgagtgaaaagaatgccattgagaaaatt
cttgctcaaactggtaattttgatgagactatggaaactgattctgatagattaatctcg
gataggttagtcgagtttaggaatattatagaattacgacaaagaaatgaggaattgttg
gtttccatcagacaattgtcgaaacagttggaatctcgtgaagaggaaaacaataattta
gaaagtgttgccattgaagaagccaaggatgctattctaactttggaaagtgaattggat
agtttgaatgttaaattagatgccgttaccaaggaaagagatgccctcaaggtgataacc
gaacaaccatcttcatccaatgctgaagcaagatatcttaatcaagttaatgaagattta
cgcaagaagattaatgaaagtgaacgtataatggctgatttgaaagaacaatcttccaag
acagttcgtgatttgagtgaaaagttgagagaagtcactgataagaagaatgaaattgct
ttacaggttactgcatctcgtcaatctgcagaattggctgaatcaagattggccaatgca
aataaatccctcgatgattcccatcaggaattgaagcaaattcgtaaggaaatacaattc
tggcaacaacaagcaaacaaacaggaatccttacttgtcaacaagactcaagaattacgt
gatttggaatccaccatttctcaaaatagagtgctcattaatacacttgaacgtgaaaag
gcattttctgataccatgcaaaaagcattacagaatgaaattgatactttgaaagccgac
aagattaaacttaacgagtttgttcttaatttacaatcactcttgaaggatcgcgaagag
tcatcgaaacaattgtcggccaaactcaatgcttcggttgaaaattatcaatcattacaa
caaaaactctctgaaaaggaagaacgtgtgcttattttaaccagtcaatcggaattagca
ttcaaggcacaaaatgccaagttggaacaagtgaacgaaatcagtcaacaattgttagaa
actagaaccaagttgtctgagaaggaacgcttagttgatgaattaagaagaaagattgag
agcttgaaagtgcaccctgctcctgctgctgctgcatctactattcctgtttcaactcat
ccttcaactgcatctcaagactttgaggtcaatcaattgaaggaagatttacgtattgct
gaacagcaagtggacgaactttcgaatcttgctaaagctagtgaaactgccttggtcaat
gccactaattcatttgagcaatacaaggttgaagccgatgctaaatatcaatcgttagtt
aaggaaaaggaatatgttgaagctgaagttaagcgtttaactgaattgagcaacaccacc
agtcaagaattagaggcaattaaatctacccatgtggaagaagtcaatgatttgaaactg
aaattgaatgaattcaaattcaaggctgacagatatgacaatttggaaagagattaccaa
gccaaggttgtttccatccgcaaggatcttgaaacccatatcaatgtttataatgatgtt
caaaataagtacaagtctgaaatgaccaagaataccttgctaggctctcaaattgaaaca
ttaaagaatgaagtggaatccaagggtaacgaaattaaacaattgaatgatgagttacaa
gcggttaaggaatcgttacaacttaaacaggaatcattaactagtgaaaaatcacaatta
gaaactgaattatccatctccaacaacaagatagttgagttgaaagaacaaaatgacttg
ttattgaatcaattggaattaaccaaaggatcaagcacaggtgaagaagaacttggagga
gatttcagacaagtggttagttatcttcgtcatgaaaaggaaaccagtgaagctaagttg
ttggttgctgttgaagaaaaccaggcattgaaggtcaacttggaaaaacttcagtacgag
ctttccatcgccaattctgctttgagcaatgctaaccaaatcaacttggatgttaatttg
aaggaacaagctgagttgtcttcccaattggagcaattacatattctcaaagaaagtaat
agtactttgagacaagaaaattccaagaaatctgaagaaattgaaaagttgaacaataag
ttggtgtccatgactaacgaattggaacctcttagaagcaaggttaatgaattatctacc
caaatcgagtttgaaaagcagcaagccctgctactttctgaagaaaatggccgcttgaaa
ctgacaactgcgcaatctgattctgctactgtcattagtttgagagaaagattgaaggag
attactcaacaagcgaacgctaagattacttctttgaatgaaaagattaaagcataccaa
actgaaatagcccaattgaagtctggattagaagacactgctgagaaggcgtcatccccg
gaagaaattgagaaggttaagcaggaaattgagagtactaagcaagaacttgccagtgcc
aaatcagagattgaggacttgaataataaattgaaggctgctaagcaagattctaacaag
tatatcaacactttaactcaagagaagaacaaccttgttattcagttaagtaccaagcaa
gcagaattaagggaacaatttaatcaagaaaaggaacaacttcgtaaatcgttgaaagaa
gaatttgaaaagcaagccggttctagtgttgctaatgaagaagaagcacaaaagaagtac
caagaacttgagcaatctgttaataagcggaaggaagaattggaaaaggaataccaagag
aagttatctagtaatgctgattcaacgaaggaaattgctgaattgaatgctaaatttgaa
cggaaattggaggaggaaaaggccagtgttaaagcacaaattgagaagatgtttgaagtg
aagattaaaatgttgaacaagaaggttgagcgtttggagaagcaaactggtaatgcccca
ccagcttcattaccggtggtgcctaatgcaactgcacctgcgcctgccatagtgtctgct
aagccggctgtagctgctagtgaatctgcatctgcaactgtagctaacgctgctgctgct
gctgctgccgctgctcaacaaaaccaaccaggctcaagcaaattccttggctatccattc
acagagagtactttgacagtgcacagaccgactgtggagaagcccgaagctaaaaagttt
agtcccacgccaaatccggttggtcaagatgggaaaaagagaaccaatcaaggtcagcaa
caaaatccaccttttaagaagagggatcatcattga
DBGET
integrated database retrieval system
