Spathaspora passalidarum: SPAPADRAFT_52107
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Entry
SPAPADRAFT_52107 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03013
Nucleocytoplasmic transport
spaa03015
mRNA surveillance pathway
spaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_52107
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_52107
03015 mRNA surveillance pathway
SPAPADRAFT_52107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_52107
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_52107
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SPAPADRAFT_52107
Spliceosome [BR:
spaa03041
]
Common components
Common spliceosomal components
Cap binding complex
SPAPADRAFT_52107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
NCAB1
Motif
Other DBs
NCBI-GeneID:
18871628
NCBI-ProteinID:
XP_007376948
JGI:
52107
UniProt:
G3ATF2
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MDVNPAKRTRDEYERDHEDTHTHTAPTSALDESFSTKRQHVDPTTELINNVCKDIRRLGE
NPNIANQIDDIAYISNPIVAEFEKIDELRSAILDTVYAVIIEQPHKIHALANLVLVCNSK
NFVVAKYVVEFLHAKVQGLLDSVGQEVEIKEGFDKEGAGVFNDIKCVLKFFSSLAPIIEG
YGIVNIFSQLLQFAIDLQESTPKRHGIAQEIYYNVLISVPYLLSNDKSPEILEKIDSIIE
LAKKFNIVETESVLLQPFDSRLGNYELPYVPKKLINLILPSLSTLQESKWEDFKLFIDFA
PFLDPIIEEALKNNTISNDIVKHSLPQFSLPSVETILKYSPHVNSIDRLWKHNSRLLFQV
YNNSTDFETVPRIETYLGLFFKDIAFDILTNLSFNKNEAAIQLSILDLFYAKDLFTAPGS
SIDQLAEVNKANQAGENTPALSTWKIEDVAVESILTMIFQLPTPLHPEIYYYTVLIACCR
ESPESIAPVFGRAIRFFYNHLETLDYELKVRFLDWMTTQISNFEYSWKWDEWVGDSERLA
GLKYHPRRNFIKNLIAKEIRLSNKSRIKDSFVSMVQNRPISTTTGDVSDEEVEDADSNAA
DAGTTIVHLSEFNQYLDISMMAPNSEQYVLDYDVELYGTDEVKDTLIKLYEQKKEQIKGK
SLVTAQDEIIYNFANPDLPYNESATKVYEFVVAHWKTNDEFSTLCQDILTSLESHPNPMQ
FLVNLVFQTYAYIGSRSIYSVVSILSRDINKLKHLSGATITYANDEPHFDTPELTPEEVT
LRQQWIIDAIFRVWIHQPQVVFLILEYLIEFGIVDAKHIVTKALESNLIIDNVSCMESVN
RILGSANKELIIVLFNQIVTNLNKVQFGDKIEEDSDDQWLFVEYLGLLKSYLRKYIKNNT
KVDYIDELKELFGAVENAKAKEEILQWVDECDV
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaatccagctaaacgtacacgtgatgagtatgagcgtgatcatgaagacact
cacacacatactgcgcccacttccgcattagatgagtcgttttctaccaaacgtcagcat
gttgaccctaccaccgaacttatcaataatgtatgtaaagatataagacgtcttggtgaa
aaccccaacatcgccaaccaaattgacgacattgcatacatatccaaccctattgttgct
gagtttgagaaaattgatgaattgcgtctggcaattttggacaccgtttatgccgtgatt
attgaacagccacacaaaattcatgcgttggcaaacttggttttggtttgtaattccaag
aactttgttgttgccaaatacgtagttgaattcttacatgctaaagtacaaggattgctt
gatctggttggacaagaagtggagattaaagaaggattcgataaagaaggtgctggtgta
ttcaatgatatcaaatgtgtgttgaaattctttagtagtttagcaccaattattgaaggt
tacggcattgtcaatatctttctgcaattgttacaatttgctattgacttacaagaaagt
acaccaaaaagacacggtattgcccaagaaatttactataatgtgttgatcagtgttcca
tatcttttaagcaatgacaagtctccagaaatacttgaaaaaattgacagtatcattgaa
ttggccaagaagttcaacattgtcgaaacagaatctgttttattacagccatttgattct
agactaggcaattatgaattaccctatgttccaaagaaacttattaatttgatcttgcct
tcattgtctactttgcaagaatctaagtgggaagattttaaattatttattgattttgct
ccattccttgatcctataattgaagaagcgctcaagaacaacaccatttccaatgatatt
gtcaaacattcacttccccagttttccttgccatcagtcgaaactatcttgaaatattct
ccacatgtgaactctattgacagattatggaaacataactcgcgtcttttgttccaggta
tacaacaactcgaccgatttcgaaactgttcctagaatcgaaacttatctaggtcttttc
ttcaaggatattgcctttgacatcttaaccaacctcagtttcaacaagaatgaagccgct
atccagctttccattcttgatttgttctacgccaaggatttatttaccgctcctggttcc
tccattgatcaacttgctgaagtgaacaaggccaatcaagctggagaaaatacacctgcg
ttatctacctggaaaatcgaagatgtagccgttgaatctatccttactatgattttccaa
cttccaactccattgcaccctgaaatctactactatactgtccttattgcttgttgtcgt
gaatctccggaatcaatagcacccgtgtttggtcgtgccattagattcttttataaccac
ttagaaactctcgattatgaattgaaggttcgtttcttggattggatgacaacgcaaatt
tctaactttgaatacagttggaaatgggatgaatgggttggtgactcggaaagattggct
gggttgaagtatcatccacgccgaaactttataaagaatttgattgccaaggaaattaga
ttgagtaacaaatcgagaattaaagacagttttgtcagcatggtgcaaaacagacctatt
agtactaccacgggtgatgttagtgatgaagaagtcgaagatgccgattctaacgctgct
gatgcaggaaccactattgtccatcttctggagttcaaccagtatttggacatatctatg
atggcacctaattctgaacagtatgttctcgactatgacgttgaactctacggtactgac
gaagtcaaggataccttgataaaattgtatgagcaaaagaaggaacaaatcaagggcaag
agtttagtcactgctcaagatgaaattatatacaactttgccaaccctgatttaccatat
aatgaatcagccaccaaagtatacgaatttgtggttgcgcattggaagaccaatgacgag
ttctccactttatgccaagatatcttgacctcccttgaatcacaccctaaccctatgcaa
ttcttggtcaatctcgttttccaaacgtatgcttacattggttcaagatctatctactca
gttgtgtcgattctttcccgagacatcaacaagttgaaacacctcagtggtgccactata
acgtatgctaatgacgagccccactttgatactcccgaactcactcctgaagaagttacc
ttacgtcaacaatggattattgatgctattttccgagtatggatccatcaaccacaagtg
gtgttccttattcttgaatacttaattgagtttggcatcgttgatgcaaaacacattgtt
actaaagcgctcgagctgaacttaatcattgataatgtaagttgtatggagagtgtgaat
cgtatccttggttctgctaacaaggagttgattattgtgttgttcaaccagatcgttacc
aatttaaacaaggtgcaatttggtgataagatagaggaagacagcgatgatcagtggtta
tttgttgaatatttgggattactcaagagttatcttagaaagtatatcaagaacaatacc
aaggttgattacattgatgaattaaaggagttgtttggagctgtggaaaatgcaaaagca
aaagaggagatcttgcaatgggtggatgaatgtgacgtgtag
DBGET
integrated database retrieval system