KEGG   Spathaspora passalidarum: SPAPADRAFT_52119
Entry
SPAPADRAFT_52119  CDS       T03101                                 
Name
(RefSeq) beta transducin
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPAPADRAFT_52119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spaa03009]
    SPAPADRAFT_52119
Ribosome biogenesis [BR:spaa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SPAPADRAFT_52119
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Utp12 ANAPC4_WD40 DSE1_N Beta-prop_NOL10_N ASA1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 CFAP251_N Beta-prop_WDR41 PEP5_VPS11_N WDR54 Beta-prop_SPT8 Beta-prop_HPS5 RMC1_N Ge1_WD40 Beta-prop_Vps41 WD40_RFWD3 PAC11 WD40_like WD_LRWD1 Beta-prop_WDR11_2nd Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 18871630
NCBI-ProteinID: XP_007376962
JGI: 52119
UniProt: G3ATG6
LinkDB
Position
Unknown
AA seq 960 aa
MVKSYDRYDQEKSFGVITSQSNIVWLPPSDVQSSSTSAGRALTSALEEILIWDIKTGEIL
SRLRDGLTPGASNAPTSSPPSVVTTLAFHEMTNIVAAGYGDGSVKVWDVSSASVVISFTG
HKSAITQLKFDRSGTRLVSGASDSTIILWDLVGETGLFKLKGHKGPISGIEFLSEVYDND
NVDDLEDYLLSSSRDGLIKLWELKSQQCIETHLAHSNECWSMAVDPKRRDMVITSGNKDQ
VKVWHLDLGEEDGSKITERGSFTKTSKNRSNEIVFKRAKVGSSYLDLFAVQNSDRTVELF
RIRSEDEIKRGITKRTKRLKEKGLDDDEILQSIQESEISMLITPFTTLRTMAKIKSISFT
NTSKQLNLLISLTNNSIEYHNVPIPENPKKATPGELYSVKKHSLDMAGHRFDIRAMDVSD
DSKLLATASNGELKIWNLRTYNVIRTFTLEGGYALCCKFLPGGSLIVVGFKNGDLELYDL
ATSSLVDRVERAHSLANDDESAAIWSLDVSPDGKTLVTGGNDKCVKFWNFKVEQEVVPGT
DAVISQLRFKHTQTLDLNEDVLCVKISPDGKYLAVSLLNNNVQVVFFDSMKLFLTLYGHK
LPVLSIDISSDSKLIITSSADKNVKIWGLDFGDCHKSIFAHQDSVMNVKFIGDSHNFFSS
GKDGLIKYWDGDKFECIQKLAAHQSEVWCMAISSDGLVMVSTSHDHSIRVWSATDDQVFL
EEEREKEMDELYENTLLNQVAEEERPRDDDEEEVDEATKVSRQTMETLKAGEKLMEALDI
GIEDIEAVKEYESLVKQGKSAVKPTPNAILLAFNMTGWEYVLSVLIKIRPSQIDDALLVL
PFSYSLKLLQLIEIWTNKQNINTNIVNLSLICKVLFFIISSNANEFINQKDPAIKNQLIK
VKQQLRDQLSGTCRQLGVNTEALKFVKQQWKLTHETEFIDERQQREYEDKKAIKRTYTTI
NT seq 2883 nt   +upstreamnt  +downstreamnt
atggtcaaatcatatgatagatatgatcaggagaaatcctttggggttataacctcacag
tccaacatagtatggcttccaccatccgacgtacagtcctcgtccacatctgcagggcga
gcattaacttctgcccttgaagaaatactcatttgggatatcaagaccggagaaattctc
agtcgactcagagatggccttacacctggtgcttctaacgctcctacttcatcaccacct
agtgtagtcaccactttagcattccatgaaatgaccaacatcgtggcagcagggtatggt
gatgggagtgtcaaggtgtgggatgtgagttcagccagtgtcgttatttcattcacgggc
cacaagagtgcaattacccagttgaagtttgatagaagtggaacgagattggtttcagga
gccagcgactccaccatcattctttgggatttagtgggtgaaactgggttgtttaaattg
aaaggacacaagggaccaatcagtggaattgagttcttgtcagaagtgtacgacaatgat
aatgtcgatgatttggaagattacttgttgagtagttcaagagacgggttgatcaaattg
tgggaattgaagagtcagcaatgtatcgagactcacttggcccatctgaatgaatgttgg
tccatggccgtggatccaaaaagaagagatatggtgatcaccagtgggaacaaagatcaa
gttaaagtatggcatttggaccttggcgaagaagacggatctaagattactgaacgagga
ctgtttaccaagaccagtaagaacagaagtaatgaaattgtgttcaagagagcaaaagtc
ggatctagttaccttgacttgtttgctgttcaaaattcagatcgaacagtcgagcttttc
cgaatcagatccgaagacgaaataaaacgaggcataaccaaacgtactaaaagactaaag
gaaaaaggattagacgatgatgaaattttgcaatcgatccaagaatcggaaatatcaatg
ttgatcactccattcacaaccttgcgtaccatggccaagataaagtccattctgttcacc
aatacttccaaacaactcaacttgttgatttcattaaccaataacagcattgaatatcac
aatgtaccaatcccagaaaaccccaaaaaagccacccctggtgaattatactcggtcaag
aaacactcgcttgatatggcgggtcataggtttgacattcgtgccatggatgtttccgac
gatagcaaactcttggccactgcttccaatggagaactcaagatttggaaccttcgcaca
tataacgtcattagaacatttactttagaaggtggatatgccctctgttgcaagttcttg
cctggtggaagtttaattgttgttgggttcaagaatggggatttagagttgtacgatttg
gctacttcttccctagttgatagagtcgaaagagcgcattcactcgctaatgatgacgaa
tctgctgctatttggtcgcttgatgtttcacccgatggaaagactttggttactggtggt
aatgacaagtgtgttaaattttggaacttcaaagttgaacaagaggttgtgccgggaacc
gatgccgttatatcccaattgcgtttcaagcacacccaaacgttagacttgaacgaagac
gttctttgtgttaagatttcccctgatgggaagtatctcgctgtttcgcttttgaataac
aacgtccaagttgtatttttcgacagtatgaaattattccttacgttatacggacacaag
ttacccgtgttatcgattgacatttcctccgattccaagttaatcatcacctcatcggcc
gataagaatgttaagatctgggggttggatttcggggattgtcacaagtccattttcgcc
catcaggattcggtcatgaatgtcaaatttattggcgacagtcataacttcttctccagt
ggtaaggacgggttgatcaagtactgggatggggacaagtttgagtgtattcagaaatta
gcagctcaccagagtgaagtatggtgtatggctatcagtagtgatgggttagttatggtg
agtacttcgcatgaccactctatcagagtatggctggctactgatgaccaagtgttttta
gaagaagaaagagaaaaagaaatggacgaattgtacgaaaacacgttattgaaccaagtt
gccgaagaagaaagaccaagagacgacgatgaagaggaagtagatgaagccacgaaagtc
agtagacaaaccatggagacattaaaagctggtgaaaagttgatggaagcccttgatatt
ggaatcgaagatatcgaagcggttaaagagtatgagctgttggtcaaacaaggcaaatcc
gccgtgaaacctactccaaatgccatcttgcttgcattcaatatgactgggtgggaatat
gtccttagtgtgttgatcaagatcagacccagtcaaatcgacgatgctttgcttgtactt
ccgttttcatactcgttgaagttgttgcaattgattgaaatttggaccaacaagcaaaac
ataaacaccaatattgtgaatttgtcacttatttgtaaagtattgtttttcataatcagt
tccaatgccaatgagtttatcaatcaaaaggacccggctatcaagaaccagttgattaaa
gtgaagcagcaattacgggaccaattaagtggaacatgtcgtcaacttggtgttaacact
gaagcattgaagtttgtcaaacaacaatggaagttgacgcatgagactgagtttatagat
gaacgtcaacagagagagtacgaggataaaaaggcaatcaagagaacatacaccactata
taa

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