Spathaspora passalidarum: SPAPADRAFT_52168
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Entry
SPAPADRAFT_52168 CDS
T03101
Name
(RefSeq) Karyopherin functions in nuclear transport of protein
KO
K20222
importin-5
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_52168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_52168
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SPAPADRAFT_52168
Pre-60S particles
SPAPADRAFT_52168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
Importin_rep_5
HEAT_EZ
HEAT_EF3_N
HEAT
HEAT_2
TOR1L1_N
MMS19_C
Vac14_Fab1_bd
INTS7_N
XMAP215_CLASP_TOG
CEP104-like_TOG
RIX1
ParcG
Htt_N-HEAT_1
Tti2
Cnd1
UTP20_N
DNA_alkylation
TPR_TNPO3_IPO13_3rd
IFRD
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
18871634
NCBI-ProteinID:
XP_007377012
JGI:
52168
UniProt:
G3ATL6
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MSLLPEDVQAVLAQLLENLSSADNAIRSAAEKSLDNEWTIQANVEMLLVFLAEQSCMGSN
DTIRSFAAVLFRRIAIKSPRELSSVTDRTIGVTSEPVRAQIRSILLKGFTSQQSNQVRHK
LSDAISEVAKEDASPAGSWNELIPTLFEATRNPDPSFRESAFRVFSATPELIDKSYLNDV
LPVFNSGFEDQTDDVRIAACTAFVAFFRELPKKNWQSLSPLLPNLLNSLPRFLQNGQDQA
LALVLESLIDLVELAPKMFKDMFPTIIDFCAAVSKNKDLESNTRMASLELLTTFAEVSPS
MCKRTPSYTEQMVLITLSMLTEVCIDDDDAAEWNNNDDTEDEDEEPEHDAARQALDRTAL
RLNGQALAAPLFQYLPAMIQSANWRERQAALMALSSAAEGCADVLMNEIPKILDLILPTL
NDDHPRVQYACCNALGQMSTDFADVIQRTAGNKILPALISKLTNKSVPRVQSHAAAALVN
FSEAASKEILEPYLDDLLSNLLGLLQSPKRYVQEQVLTTIAIIADAAEKTFIKYYDTLMP
LLTDVLKTDMGDENRLLKAKCIECATLIALAVGKEKFAPHCQDLIQLFGHIQETATQDDD
PVKQYLEQAWGRICRIIGKDFIPYLPSVLPPLLTSAKATQDISLLEEEQAEEFNSNEEWD
VINLSGKLIAVHTAALDEKVAAIDLLRTYAIQLKGDFFPWVKEIIEDIAIPGLDFYLHDG
VRGSAALTLASLLKCSVVATGNNSTETLVFWSKISEKLVEVLTNEPVPELLVAYYTALVE
CITVLGPNSLSSPQLDSLAKSINTNLVEICERIKARDNEDDEYTEDVEEDEDEYTDEELL
DEINKALSSIFKNSQANFLPHFQILIPTVASFINDENTNIKLCGLCVVCDILEHCGPNSV
IYRDMFANVVAESITSPHASIRQASSYAVGVAAQFGGEDYAQFCLACLEPMFKMASVPDA
RAEENIHATENSVSAIAKICHRFSSTIPNLNTIIDQWITLLPIVQDESAAPFAYMFLSEL
IENNHPSINNQIPKVVDSVIQALAHASIAGATAERVVAATRQLLGSVPHSEAIALLQKNP
ADIDIVQKYFS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcattattaccagaagatgtacaggctgtgttagctcagttgttggaaaatttatcc
tcggccgacaatgctatcagatctgctgctgagaaatcccttgataatgaatggaccatc
caagccaacgttgaaatgctccttgttttcttagccgagcaatcatgcatgggaagtaac
gataccattagatcattcgcagcagtcttgtttagaagaattgccataaagtctcctcgt
gaattatccagtgtcaccgatagaacaattggtgttactagtgaaccggtcagagcccaa
attagatcaatcttattgaagggattcacttctcaacaatcaaatcaagtcagacacaag
ctttccgatgcaatttctgaagttgccaaggaagatgcgtctccagcaggttcttggaat
gagttaatacctaccttatttgaagccactagaaatccagatccaagtttccgcgaatca
gccttcagagttttctcagctactcctgaattgattgacaagtcttatttgaatgacgta
ttgcccgttttcaattctgggttcgaggaccaaactgatgacgttcgtattgctgcatgt
actgctttcgtagctttctttagagaactcccaaagaagaactggcaatctttatctcca
ttattaccaaacttgttgaactcattacctagatttttacaaaatggtcaagatcaagca
ttagcattagttttagaatctttgattgatttagttgaattggccccaaagatgtttaaa
gacatgttccctaccattatcgatttctgtgctgctgtttctaaaaacaaagatttggaa
tcaaacactagaatggcatcacttgaattgcttactacatttgctgaagtttctccttca
atgtgtaagcgtactccatcttataccgagcaaatggtattaataaccttgtctatgttg
actgaagtttgtatcgatgacgatgatgccgctgaatggaacaacaacgatgacactgaa
gatgaggatgaagaacctgaacatgatgctgccagacaagctttggatagaaccgcattg
agattgaatggtcaagcattagctgcccctcttttccaatatcttccagccatgatacaa
tctgccaactggagagaacgtcaagcagcacttatggctctttcttctgccgccgaaggt
tgtgctgacgtgttgatgaatgaaatcccaaagattttagatttgattttaccaactttg
aacgatgaccatccaagggttcaatacgcttgttgtaacgctttaggtcaaatgtctact
gattttgccgacgtgattcaaagaactgcaggtaataagattttaccagcgttaatttca
aagttgaccaataaatcagtgccaagagtccaatcgcatgctgctgctgctttagtcaac
ttttctgaagctgcttcaaaagaaatattggaaccatacttggatgacttgttgagcaac
ttattaggcttgttacaatctcctaaacgttatgtccaagaacaagtattgaccaccatt
gctataattgccgatgctgctgaaaagacatttataaagtactacgacacattgatgcct
ttgctcactgatgttttaaaaacagatatgggtgacgaaaacaggttattgaaggccaag
tgtattgaatgtgctactttgattgccttggctgttggtaaagaaaagtttgcccctcat
tgtcaagatttgatccaattatttggtcatattcaagaaaccgctactcaagatgatgac
ccagtcaagcaatatcttgagcaagcttggggaagaatctgtagaataataggtaaggat
ttcattccttacttaccttcagtgttaccaccattattgacttctgccaaggctacccaa
gatatttccttattggaagaagaacaagctgaagaattcaactctaacgaagaatgggat
gtcattaacttatctgggaaattgattgccgttcataccgctgctttagatgaaaaagtt
gctgctattgatttactcagaacttatgctattcaattaaagggtgattttttcccatgg
gtcaaggaaatcatcgaggatattgccattccaggattggacttttatttacatgacgga
gtaagaggatctgccgctttaaccctcgcttcattgcttaaatgttccgtagttgcaact
ggaaacaattctactgaaacattggtattctggtccaagatctccgaaaagttggttgaa
gtattgaccaatgagccagttccagaattgcttgtggcttattataccgccttagtggaa
tgcatcactgtattgggaccaaactccctttcttcacctcaattggattcattggccaag
tctattaataccaatcttgttgaaatttgtgagagaattaaagctcgtgataacgaagat
gacgaatataccgaagatgttgaagaagatgaagatgaatatactgacgaagaattactc
gatgagattaataaggccctttcgtccatattcaagaactcacaagctaacttcctccca
catttccaaatattaattccaaccgtggcttcatttattaatgatgaaaataccaatatc
aaactttgtgggttatgtgttgtgtgtgacattttggaacattgtggtccaaactcagtt
atttatagagatatgtttgctaatgttgttgctgaatctatcacatcaccccatgctagt
attagacaagcaagttcatatgctgttggtgtcgcagcccagtttggaggagaagattac
gctcaattctgtttagcttgtttggaacctatgtttaaaatggcttcggttcctgatgcc
agagccgaagaaaacatccatgccacagaaaattcagtttctgccattgccaagatttgt
cacaggttttccagcactataccaaacttgaacactataattgatcaatggattacatta
ttgccaattgttcaagatgaatcggcggctccttttgcttatatgttcttgagtgaattg
attgaaaacaaccatccttccattaacaatcaaattccaaaggttgtcgattctgttatt
caagcacttgcacatgcttctattgctggtgctactgcggaaagagtcgttgctgctaca
agacagttgttgggttctgtacctcacagtgaagccatagcccttttacaaaagaaccca
gcggatattgatattgtccagaaatactttagctga
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