Spathaspora passalidarum: SPAPADRAFT_53113 Help Entry SPAPADRAFT_53113  CDS       T03101                                  Symbol RPB2 Name (RefSeq) DNA-dependent RNA polymerase II   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism spaa  Spathaspora passalidarum Pathway spaa03020   RNA polymerase spaa03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:spaa00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     SPAPADRAFT_53113 (RPB2)   09124 Replication and repair    03420 Nucleotide excision repair     SPAPADRAFT_53113 (RPB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:spaa03021]     SPAPADRAFT_53113 (RPB2)    03400 DNA repair and recombination proteins [BR:spaa03400]     SPAPADRAFT_53113 (RPB2) Enzymes [BR:spaa01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      SPAPADRAFT_53113 (RPB2) Transcription machinery [BR:spaa03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      SPAPADRAFT_53113 (RPB2) DNA repair and recombination proteins [BR:spaa03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       SPAPADRAFT_53113 (RPB2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_3 MRNIP Motif Other DBs NCBI-GeneID:  18871763 NCBI-ProteinID:  XP_007372090 JGI:  53113 UniProt:  G3ADV4 LinkDB All DBs Position Unknown AA seq 1238 aa AA seqDB search MSTQNQHLHEEEDDPYMYDDGDSQSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIETTI QELVWEDSHLILDQPAQHTSESDHENRRYEITFGKIYISKPSQTEGDGTTHPMFPQEARL RNLTYSSPLYVDMTKKVFKSDDNKRKENNELDWIEEKVEDEDPRTKVYLGKVPIMLRSKF CMLRDLGEHDFYELKECPYDMGGYFVINGSEKVLIAQERSAANIVQVFKKAAPSPISHVA EIRSAIEKGSRLISSMQIKLYGRDEKGVSARTIKATLPYIKEDIPIVIVFRALGVVPDGD ILEHICYDANDWQMLEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRREKRIQYAKDILQ KELLPNITQEEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLF RILFKKLTKDIYNYMQRCVENDKEFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRA GVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVK NLSLMTCISVGTPSEPILYFLEEWGMESLEDYVPSNSPDSTRVFVNGVWVGTHRDPVNLV DTMRSLRRRGDISPEVSIIRDIREKEFKIFTDAGRVYRPLFIVDDDSESETKGDLKLQKE HVLKLLNSEYDDYDGDEGYNWTSLVNDGIVEYVDAEEEETIMIAMTPEDLEASKNTLSQT QIKAMQVEEQELDPAKRIKPVFSSATHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTY QSAMGKQAMGVFLTNYSVRMDTMANILYYPQKPLATTRSMEFLKFRELPAGQNAIVAIAC YSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDLEKRQGMKALETFEKPSRSDTLRLKHGT YEKLDDDGLIAPGVRVSGEDIIIGKTTPIPPDTEELGQRTQYHTKRDASTPLRSTESGIV DQVLLTTNGDGAKFVKVRMRTTKVPQIGDKFASRHGQKGTIGVTYRHEDMPFTAQGIVPD LIINPHAIPSRMTVAHLIECLLSKVSALSGLEGDASPFTDVTAEAVSRLLREHGYQSRGF EVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLR FGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGSCGLMSVIANLKKNQFECRSCKNKT NIYQIHIPYAAKLLFQELMAMNISPRMYTERSGQTVRV NT seq 3717 nt NT seq  +upstreamnt  +downstreamnt atgtcgacacagaatcaacacttgcatgaagaggaagatgatccatacatgtacgatgat ggtgattctcaaagtatcactccagaagattgttggacagtgatatcctccttcttccag gaaaagggattggtatcgcaacaacttgattcttttgatgaattcatcgaaaccacgatt caagaattggtctgggaggattcacatttgattttggaccaaccggctcaacacacttca gagtctgatcatgaaaatagaagatatgaaattacgtttggaaaaatttacatttccaaa ccatctcaaactgaaggcgatggtaccactcatcctatgttcccacaagaagcaagatta cgtaatttgacttactcttctcctttgtatgttgacatgaccaagaaggtgtttaaatct gatgataataagaggaaggaaaataacgagttagactggatagaagagaaggttgaagat gaagacccaagaaccaaagtgtatttgggtaaagttccaatcatgttgagatccaagttt tgtatgttgagagatttgggtgaacacgatttctatgaattgaaggaatgtccgtacgat atgggtggttatttcgttatcaatggttcagaaaaggtcttgattgctcaagaaagaagt gccgccaacatagtccaagtgtttaagaaggccgcaccatctccaatttcccatgttgct gaaatcagatctgccatcgaaaaggggtccagattgatttcttctatgcaaatcaaatta tatggtagagatgaaaagggtgtttccgcaagaacaatcaaagccaccttgccttatatt aaagaagatatccctattgtcattgtatttagagcattaggtgttgtcccagatggtgac atcttggaacatatatgttatgatgccaatgactggcaaatgttggaaatgttgaagcct tgtgttgaagaaggtttcgttattcaagaacgtgaagttgcgttggatttcattggtaga agaggggtattgggtatcagaagagaaaagcgtattcaatatgccaaggatatccttcaa aaggaattgttaccaaacatcactcaagaagaagggtttgaaactagaaaggcgttcttt ttgggttatatggtgaatagattattattatgtgcattagaaagaaaagaacccgatgat agagatcactttggtaagaagagattggatttagctggtccattattagccaatttattc agaattttgtttaaaaaattaaccaaagatatttataattatatgcaaagatgtgtggaa aatgataaggaattcaacttgactttagctgtcaagtcacaaaccattactgatgggttg agatactccttggccaccggtaactggggtgaacaaaagaaggctatgagttccagggct ggtgtttctcaagtgttgaaccgttatacttattcatccacattatcacatttaagaaga acaaacactcctattggtagagatggtaagattgccaagccaagacaattgcataacacg cattgggggttggtttgtcctgcagaaactccagaaggtcaagcgtgtgggttggttaag aatttatccttgatgacttgtatttccgttggtactccttcggaacccatcttgtacttt ttggaagaatgggggatggagtctttggaagactatgttccatctaactctcctgattct accagagtgtttgttaatggtgtctgggttggtactcatagagacccagtcaatttagtg gacactatgcgtagtcttagaagaagaggggatatctcaccggaagtatctattattaga gatattagagaaaaggagtttaagattttcaccgatgctggtcgtgtttaccgtccactt ttcattgttgacgatgattcagaatccgaaactaagggtgatttgaaattacaaaaggag catgtactcaaacttttgaattccgaatatgatgattatgatggtgatgaagggtacaat tggacttctttagtcaatgatggtattgtcgaatacgttgatgctgaagaagaagaaact attatgattgccatgactcctgaagatttagaagcatccaagaataccttatcacaaaca caaatcaaagcaatgcaagttgaagaacaagaattggatccagctaagagaattaagccg gtgtttagcagtgctactcatacattcacccattgtgaaatccatccttctatgattttg ggtgtggctgcttccattattccattcccagatcataaccaatctccacgtaatacatat caatctgcgatgggtaagcaagccatgggtgttttcttgaccaattactcggtgagaatg gataccatggccaatatcttgtattatcctcaaaaaccattggccacgacgagatcgatg gaatttttgaagtttagagaattacctgcaggtcaaaatgccattgttgccattgcttgt tactcgggttataaccaagaagattctatgattatgaaccaatcctcgattgatcgtggg ttgtttagatcattattctttagatcttatatggatttggaaaagagacagggtatgaag gcacttgaaacttttgaaaagccttccagatcagacacattaagattgaagcatggtact tatgagaagttggatgacgatgggttgattgctcctggggttagagttagtggtgaagat atcattattggtaagaccacaccaataccaccagacacggaagaattaggtcaaagaact cagtatcataccaagagagatgcttctactccattgagaagtactgaatctggtattgtt gatcaagtgttgttgacaactaatggtgatggtgccaagtttgtcaaggttagaatgaga actactaaagtgccacaaattggggacaagtttgcttctagacacggtcaaaagggtact attggggttacgtacagacacgaagatatgccatttactgcacaaggtattgtgccagat ttgatcattaacccccatgctattccatctcgtatgacggttgcgcatttgattgaatgt ttattatcgaaagtgtcagcattatctggtcttgaaggtgatgcttctccatttactgat gttactgccgaagctgtttccagattgttgagagaacatgggtatcaatccagagggttt gaagtgatgtacaatggtcatactggtaagaagttgatggctcaagttttctttggacct acttattatcaaagattaagacatatggtggatgacaagatccatgctagagctagaggt cctgttcaagtgttgactagacaaccggttgaaggtagatcgagagatggtgggttgcgt ttcggggaaatggaaagagattgtatgattgcccatggtgctgctggattcttgaaggaa agattgatggaagcatccgatgcatttagagttcatgtttgtggactgtgtgggttgatg tcggttattgccaatttgaagaagaaccaatttgaatgtcgttcgtgtaagaacaagacc aacatttaccaaattcatattccatatgctgccaagttgttattccaagaattgatggcc atgaacatttctccaagaatgtataccgaaagatctggccagactgttcgtgtgtaa

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