Spathaspora passalidarum: SPAPADRAFT_53861
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Entry
SPAPADRAFT_53861 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K18720
nucleoporin NUP145
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_53861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_53861
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAPADRAFT_53861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
AAA_3
Motif
Other DBs
NCBI-GeneID:
18871817
NCBI-ProteinID:
XP_007373102
JGI:
53861
UniProt:
G3AER4
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MSTFGNNNWGASTGFGRRASLSGPPASASSTGGGGLFGNSSTGFGQGAANSTTAANTSTS
GGLLSNKRPASGGGLFGSSSTGGQQNQGNPLFQQQPQQQSSLLTVQNSNPYSYNQLLTNL
QASNDTMPESIITQIFSPAQHQAKDMPERKRRFSYLEKPEAHKPKSSLLAKLGQTFRFIR
GVSKTNDNNVKGLFSQSDDLLKKPVLPIQTPAISTKNAVKSYRQVDARRVGSMKRLVIKS
KPVKYHLIDVNKVFNAKRRKVENNVVTADKLLTEKYLSDSDDDDEVVDTRKSLDSRYAYK
VNKDRATGANIIEDTFTPQEETQEEKDKATTMHDGYWCSPTIFELSQMSLEELSSVDNFI
IGRIGYGQITYSRPVDLSTIMLDAKDHGHSLDKELFDNVIQITKRHILAYKNYPAKPPIG
QGLNVPAMITLEGMVPTKGRSLAEHIAFLKNQVGQEFITYDPITHTWVFKVNHFSVWGLV
EEEDGPELMEMKRKQDEQEHQSYLEYSKVYGDESIKKEVTKKALYDQVKVFPGSWEYEYT
STPDPLNLKRELVSNEILEQLNKLKSEEYEEERNPYEVQMLPSDVDIAEIVDEKVYEPEI
DDDAVFDSIQTRPNLPTSDDWLIQLELANDLNSALAPYNSIVKPSQKLTLEKVDGLLFSD
FNNSIIEKQKLETISDEIEVDDEEQDDIYANNISEVVSRVLSQSEIVSRESTYPKVIFTR
DLTMKSFITTDMTDSEREVITLASALFDNDEVDREINQLPSKSNTTLIEAITERTRRNLF
GEWLKNYNKSAINNLLSTHKSDPLESVFIYLCSGDLMKAIEAAIDTNNGHLSVILNLADS
NDEVVKQIAAQQLKQWLENGMNVPKALVKIYTILSGEIDSLAAGLPWNIALALHLFYGGT
SLTELVFEFKDRVPEGLPVVDVLKLAFILPLDVASISNTSLNKKLKWYFCKVLAGSASFD
DVTKSFGDYLASVKLWKDAIFVYSHLSNDAESQELIRELIIANISSLKCDQGYLMDVLKV
PKTVIYEAISIEKRAAGDFWGEVEALETVALWEMAHSTIISELGPSTVISNNGDDIDHFE
RLITPFPRHGLIIPDWNVGAGIYVAYFKFLKQKNNVDASIIDFLLTNIPLVKHSPESFTQ
KVALNIISKSVGDYIIESEFADKKDEVVKLYLDTVDLEYFKLRLSIQ
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtttggtaataataattggggtgcatccacaggatttggaagaagagcatca
ctcagtggtccaccagcatcagcttcgtctactggtggtggaggtttatttggtaattca
tcaactggatttggacaaggtgcagcaaatagtactactgccgccaacacatcaacttct
ggtggattattgagtaataaacgacctgcatctggtggtggactttttggaagttcttct
actggtggacagcaaaaccaaggaaatcccctctttcaacaacagccgcaacaacaatcc
tccttgcttacagtacaaaactcaaatccatacagctacaatcaactcctcacaaatcta
caagcgtccaatgataccatgcctgaatcaatcattacacaaatcttctctcctgcccaa
catcaagctaaggatatgcctgaaagaaagagaagattttcatatttggaaaaaccagag
gcgcataaaccaaaatcgtcactcttggctaaattaggacaaacgttcagattcattcgt
ggggtatctaaaactaatgataacaatgtgaaaggattgtttagtcaatctgatgatttg
ctaaagaaaccggtgttgcctattcaaacaccagctatctctactaaaaatgcagttaaa
ctgtatagacaagttgatgctagaagagttggaagtatgaaacgattagtcattaagtcc
aaaccagtaaaatatcatttgattgatgtgaataaggtgtttaacgccaagagaagaaag
gtggagaataacgtggttactgctgataaattattgactgaaaaatacttgagtgacagt
gatgacgatgatgaagttgtcgatactagaaagtctcttgattcaagatacgcatacaag
gtcaacaaagatcgtgcaactggtgctaatattattgaagatacatttactccacaagaa
gaaactcaggaagagaaagataaagctacaaccatgcatgacggatactggtgttcacct
actatttttgaactctcacagatgtcattggaagaattgtcttctgtggataatttcata
attggaagaataggttatgggcaaatcacatactctagaccggttgatctttctaccatc
atgcttgatgctaaagatcatggacattcattagacaaggaacttttcgataatgtaatt
caaatcacgaagagacatattcttgcatacaagaactatccagcaaagccaccaattgga
caaggattaaacgttcctgctatgatcacacttgaaggtatggtacctaccaagggaaga
tccctagctgaacatatcgcattcttgaagaatcaagttggacaagaattcatcacctat
gatccaatcactcatacttgggtgtttaaagtaaaccactttagtgtttggggattggtt
gaagaagaagatggtcctgaattgatggaaatgaaacggaagcaagatgagcaagaacat
caatcttatcttgaatattccaaagtatatggtgatgaaagtattaagaaagaagttacc
aagaaggcgctttatgatcaagtcaaagtatttcctggaagttgggaatatgaatacact
tcaacccctgatccattaaaccttaagcgtgaattagtatctaatgaaattcttgaacaa
ttgaacaagctcaagagtgaggagtatgaagaagagagaaacccttatgaagtacaaatg
cttccttctgatgtagacattgctgagattgtggatgaaaaagtttatgagccggaaatt
gacgatgatgcagtatttgacagcattcaaactagacccaatttacctacttccgatgac
tggttgattcaattggagttggctaatgatttaaattctgccttggctccatataacagt
attgtgaaaccatctcaaaagttgacgttggaaaaagttgatggattgttgttttccgat
tttaataatctgattattgaaaaacaaaaattggagactatctctgatgaaattgaagtt
gatgatgaagaacaagatgatatttatgcaaataatatttccgaggtggtttctagagtg
ttatcccaatcagaaatagtcagtagagaaagcacctatcctaaagtcatatttactaga
gatcttaccatgaagagtttcataactacagacatgaccgattctgaaagggaagtaatt
actttagcctctgccttatttgataatgatgaagttgatcgagaaattaaccaattacca
ctgaaatccaacactacacttattgaagccatcactgaaagaactagacgaaacttattt
ggagaatggttgaaaaactataacaaatcagcgattaataacttacttctgactcacaag
tctgaccccttagaaagtgtttttatttatttatgttccggtgacttgatgaaagcaatc
gaggcagctatagatactaataatggacatttatcggttattttaaacttggctgattcc
aatgatgaagttgtcaagcaaattgcagctcagcaattgaaacaatggttggaaaacggc
atgaatgtacctaaggctcttgtgaagatttatactatattgagtggagaaattgacagc
ttggctgctgggttgccttggaatatagctttggcattacatttgttctatggtggtaca
agtttgactgaattggtgtttgaatttaaggatagagttcctgaagggttacctgttgtt
gatgttttaaaattggcattcatattacctctagacgtggctagtatttccaacactagt
ttaaacaagaagttgaagtggtatttctgtaaagttttagctgggagtgcatcgtttgat
gatgttaccaagtcatttggtgattacttggcgtcagttaagttatggaaggatgccatc
tttgtatactctcatttatccaatgacgctgaatcacaagaattgattcgtgaattaatt
atcgccaatattagtctgttgaaatgtgatcaaggttacctaatggatgtattaaaagtt
ccaaaaacagttatatatgaagctatatctattgagaaacgtgccgctggagatttctgg
ggagaagttgaagccttggaaactgttgcattatgggagatggcacattccaccatcatt
tccgaattgggtccatctacggttatttctaataatggtgatgatattgatcatttcgaa
cgattgataactccattccctagacatgggttgatcatacctgattggaacgtgggtgca
ggaatatatgttgcctatttcaaattcttgaaacaaaagaataatgttgatgctagtatt
attgactttttgttgactaatattcccttggttaaacattcaccagaatcctttactcaa
aaagttgcattaaatatcatttcaaagagtgtcggggattacattattgaaagcgagttt
gccgataagaaggacgaagtggttaagttatatttggatactgttgatcttgagtatttt
aaacttcggttatctatacaataa
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integrated database retrieval system
