KEGG   Spathaspora passalidarum: SPAPADRAFT_55858
Entry
SPAPADRAFT_55858  CDS       T03101                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03022  Basal transcription factors
spaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SPAPADRAFT_55858
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPAPADRAFT_55858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spaa03021]
    SPAPADRAFT_55858
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_55858
Transcription machinery [BR:spaa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SPAPADRAFT_55858
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     SPAPADRAFT_55858
SSDB
Motif
Pfam: Tfb5 DAAF9_N
Other DBs
NCBI-GeneID: 18871981
NCBI-ProteinID: XP_007375676
JGI: 55858
UniProt: G3AMY6
LinkDB
Position
Unknown
AA seq 69 aa
MLVASKGVLVQCDPSIRALILQIDAESPGIVLEELDDTHLLIQHDKVQIVKNELNKLLSK
NIYNPFDEE
NT seq 210 nt   +upstreamnt  +downstreamnt
atgttagtggcaagtaaaggagtgttagttcaatgtgatccttccatacgggcattgatt
ttacaaattgatgcagagagtcctggtattgtcttggaagaattagatgacacacatttg
ttgatacagcatgataaggttcaaattgtcaagaatgaattaaataagcttttgtccaag
aatatttataacccatttgatgaagaatag

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