Spathaspora passalidarum: SPAPADRAFT_57886
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Entry
SPAPADRAFT_57886 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_57886
04131 Membrane trafficking [BR:
spaa04131
]
SPAPADRAFT_57886
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SPAPADRAFT_57886
Membrane trafficking [BR:
spaa04131
]
SNARE
SNARE associated proteins
Others
SPAPADRAFT_57886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
MUCL1
Motif
Other DBs
NCBI-GeneID:
18872237
NCBI-ProteinID:
XP_007372219
JGI:
57886
UniProt:
G3AF03
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MDQQSSNKSPNPYSETPIILSPPPLEQEQQRHIQQQLQSHSQKPQPMSLPPFAQHTAAPS
SNQLPQGHSERQQSVGYNLQHEFETLTADLDLDLRNNLPTHYENQPPSKPPLEVPQPQHL
SASSVNETSLKSPGLMAPSAKYGALGADLLGISSSGSSSALLRDSALSPIPQIPSANLAS
LLKPNGVSSYNSQNSSTTPGNTSTGFLGPPPLASIPDRPQSVNDFSNIFNRNELNSFQSY
AQPQQAPQPQQQQQLGQASFYSDLLVFSNWIENLNPQDNITMIDYLCNSLPLDILLAFKS
RLDHHLQAPKLQTQPAQAQAAQQQNFNLMSPLNNSYSQDLYTDIEQLNLQDSKLQQQPQQ
LQHPKPTFRQGAQYLNIMDRIARPKSAEPSASGIRYGNSQQQFERSRSPTSHLYEKTNFL
QLAAVTNAPVRHHYGHDDDLSSHTALKLGALATINSRVALDSNRKHGHSHGATGATWNLT
MQQQQQQQQQQQQQQPQQPQPQHKHTQSRTHAAVAYEDSLNRSLNSASVPANLHRTTSSK
SSSSKKKGPQSPTSNNTSTTAATAAAAGSTTPSTTTSSSMPSEVANIELLNNIPAWLKLL
RLHKYTECLKDIPWKELIELDNDELEAKGVAALGARRKLMKAFDAVKASLNEKE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcaaagttcaaacaagtctcctaacccgtactcagaaactcccattatattg
tccccacctccattggaacaagagcaacaacgtcacatacaacaacaactccaatcacat
ctgcaaaaaccacaacctatgagcttaccaccgtttgcccagcacactgctgctccttcg
tccaaccaacttcctcagggccactcggaaagacagcaaagcgtaggatacaatttacaa
cacgagtttgagactctcactgcagatttggatttggatttgcgaaacaatttacctacc
cattacgaaaaccagccgccgtcgaaaccgccacttgaagtgccacagccacaacacttg
tcagccagttctgtcaatgaaaccagcttgaaatcacctggattaatggccccatcggcg
aaatacggtgctttaggtgcagatcttttaggaatctcttcatcaggttcatcatcagct
ttgctccgtgattcggcattgtcgccaatcccgcaaattccctccgcgaaccttgcgtcg
ttgttgaaacctaatggcgtctccctgtacaactcgcaaaatagcagcacgacccctggg
aacaccagtactggattcttgggccctcctccattagcatcaatccctgatcgtccgcaa
tctgtcaatgactttagcaatattttcaatcgtaacgagttaaacctgtttcaatcatat
gctcagccccagcaagcaccacaaccgcaacaacagcaacaactcggccaagcaagcttt
tatctggatttattagtatttagcaactggattgaaaacttgaatcctcaagataatatc
accatgattgattatttatgcaacagtttgccgcttgatattttgctagctttcaaatca
aggttggaccaccatttacaagcacccaaattgcaaacccagcctgcgcaagcccaggct
gctcaacaacagaatttcaatttaatgtctccgctcaacaattcctattctcaggattta
tatactgacattgaacaattgaatcttcaagattcaaaactccaacagcagccacaacaa
ttgcaacatccaaaacctacattcagacaaggcgcccaatacttaaacattatggatcgc
attgccagacctaaatcggcagaaccatctgcttctgggatcagatatggtaattctcaa
caacagtttgaaagatcaagaagcccaaccagtcatttatatgagaagacaaatttctta
caattggctgcagttaccaatgcacctgtgcgtcaccactacggacatgacgacgattta
tcatcacacaccgcattgaagttgggagcattagccacgattaattcccgcgtagccctt
gattcaaacaggaaacatggacattctcacggtgcaactggggccacttggaacctaacc
atgcaacaacaacaacaacagcagcagcagcaacaacaacaacaaccgcaacagccacaa
ccacaacataaacacactcaatcgagaacccatgctgctgttgcctatgaggattctctt
aacagaagtttgaattctgcttctgtgcccgctaatcttcaccgtacgactagttcaaaa
tcaagctcttctaaaaagaaaggaccgcaatcgccaacatctaacaatacactgaccact
gcagcaactgcagcagcagcaggtagcactaccccatcgactaccacttcctcgtctatg
cctagtgaagttgccaatatcgagttattaaacaatattccagcttggttaaagttgttg
cgcttacacaagtatactgaatgccttaaggacattccatggaaggaacttattgagttg
gataacgatgaattggaagccaagggggttgcggcgttgggagccagacgtaagttgatg
aaggcgtttgatgctgtcaaggccagcttgaacgaaaaagaataa
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