Spathaspora passalidarum: SPAPADRAFT_58025
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Entry
SPAPADRAFT_58025 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPAPADRAFT_58025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_58025
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
SPAPADRAFT_58025
U7-dependent histone pre-mRNA processing factors
SPAPADRAFT_58025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
18872288
NCBI-ProteinID:
XP_007372313
JGI:
58025
UniProt:
G3AFB2
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MDSKSTSVSIGKFPFDYTEEQVLEIAKSVGPVLDVKLLFDDLTGKSKGYAIINYADNETA
ASAVRNLNYMTLPNGRFLKCSFISEFENETIAKLPPLPLGIQIHPNQNASQVISSILSNI
DSQAALQIMKEIRDMSVDNPKSTKLLLERFPQLALALVELGMISNTTNQELIELTLNKRI
PDLKELSYDHVRLLHAVNDLSDSDITTLDERQQEIVKKVKAEIEKGTYGEVLDSAA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaaaagtacaagtgtatccattgggaaattcccatttgattatactgaagaa
caggttttagaaatcgccaagtcagtaggccctgtgctcgatgtcaaacttttgtttgat
gaccttactggtaaatctaagggatacgccatcataaactacgctgataatgaaactgct
gcttcggcagtacgaaatttgaactatatgacgttacccaatggacgattccttaaatgt
tcattcattagtgaattcgagaatgaaactattgccaaattaccgccattacccttgggt
atacaaatccatccgaaccaaaatgcatcccaagtcatttctagcatattgtctaatatc
gattcacaagctgcattgcagatcatgaaagagattagagatatgagtgtggacaatcct
aaatctacaaagttgttactagaacgatttcctcaattggcccttgcgttggtcgaactt
ggtatgatttcaaacacaaccaatcaagaattaattgagttgacgttgaataaacgaatt
cccgaccttaaagaactttcgtatgatcatgtcaggttattacatgcagtcaacgatttg
agtgattcagatataactaccttggatgaacgtcaacaagagattgttaagaaagtcaaa
gcagaaatagaaaagggaacgtatggtgaagtattagatagtgccgcttga
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