Spathaspora passalidarum: SPAPADRAFT_58062
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Entry
SPAPADRAFT_58062 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAPADRAFT_58062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaa03021
]
SPAPADRAFT_58062
Transcription machinery [BR:
spaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SPAPADRAFT_58062
Prokaryotic type
Archaeal type
TFB
SPAPADRAFT_58062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_3
DUF2824
Motif
Other DBs
NCBI-GeneID:
18872301
NCBI-ProteinID:
XP_007372345
JGI:
58062
UniProt:
G3AFE4
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAPAGNMSTIHDQFTGPNLNVTLTCPECKIFPPDLIERFSEGDIVCGSCGLVLSDRVVDT
RSEWRTFSNDDQNGDDPSRVGDAGNPLLDTEDLSTMISYVPENSRAGRELNRAHQKNTVD
KKDNALAAAYQKISQMCEGYQLPKIVQDGAKEVYKMVHDEKPLRGKSQESIMAASIFIGC
RKAKVARSFKEIWALTNVPRKEIGKVFKIMDKVIREKNAANPTNAIYFSQDNIQTTQTSA
EDLIRRFCSHLGLHTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAALVFGADLAP
SKISDKTGVSDGTIKTSYKVMYEEREKLIDPYWIETGKVKLENIPKS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagctggaaatatgagtaccattcacgaccaattcacaggacctaacttgaac
gtcacgctaacctgcccggagtgtaagatcttcccaccagatttgatagagagatttagt
gagggagatatcgtgtgtggaagttgtgggttggtgttgagtgatcgtgtggttgatact
cgttcggaatggagaacgtttagtaatgacgatcaaaacggtgacgatccatcccgtgta
ggtgatgccgggaaccccttattagataccgaagatttgtcgacgatgatttcgtatgtt
cctgagaacagcagggccggaagagaattgaatcgtgcacaccaaaagaataccgtagat
aagaaggacaatgcgttggcagcagcatatcaaaagatttcgcagatgtgcgaagggtac
caattaccgaagattgtccaggatggagccaaggaagtgtacaagatggtacatgatgaa
aaaccattacgagggaaatcacaagagtccatcatggcagcttcgattttcattggatgt
agaaaggccaaagttgctcgttcatttaaagaaatctgggccttaactaatgttcctaga
aaagagattggtaaagtattcaagattatggacaaggtaattcgagaaaagaatgccgca
aatccaaccaatgctatctactttagtcaagataacatccaaaccacacaaacgtcagct
gaagatttgattagaagattttgttcccatttggggttacatacacaggttaccaatggg
gcagagtatattgccagaagatgtaaagaagttggtgtccttgctggtcgttctcccacc
actattgcggctacagttatctatatggcggcattagtgtttggtgctgatttagcacct
tctaagatttctgacaagaccggtgtcagtgatggtactattaagacctcttataaggta
atgtacgaggaaagagaaaaacttattgatccttattggattgaaactgggaaagtaaaa
ttggaaaatattccaaagagttga
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integrated database retrieval system