Spathaspora passalidarum: SPAPADRAFT_58066
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Entry
SPAPADRAFT_58066 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03015
mRNA surveillance pathway
spaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPAPADRAFT_58066
09123 Folding, sorting and degradation
03018 RNA degradation
SPAPADRAFT_58066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_58066
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_58066
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SPAPADRAFT_58066
mRNA cycle factors
Stress granule specific factors
SPAPADRAFT_58066
Spliceosome [BR:
spaa03041
]
Complex C
Other components
Complex C specific factors
SPAPADRAFT_58066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
YflT
RRM_occluded
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
18872304
NCBI-ProteinID:
XP_007372350
JGI:
58066
UniProt:
G3AFE9
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MWSQRDPSSRRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDDMGQSKCFGFV
HYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANYTNIYVKNIDLEFS
DEEFEKLFVPFGTITSIYLEKDQDGKSKGFGFVNYETHESAVKAVEELNDKEINGQKIYV
GRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSA
KVMVDEAGKSKGFGFVCFSSPEEATKAITEMNQRMILGKPLYVALAQRKDVRRSQLEQQI
QARNQMRMQNAAASGGIPGQFIPPMFYGQQGFFPPNGRGNAPFPGPNPQMMMRRGQQFPG
PEQWPRPGPNGQPVPVYGIPPQFQDFNGQPMRQQQRGGYYPNRNQNKGGRQQKDLAAIIA
NAPPDQQKRILGEELYPKIVATGKAQEPEAAGKITGMMLGLENQEILDLLEDDELFNNHF
EDALTAFEEYKKSEAGAPAPAAPEQPQA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcccaaagagacccatcttccagaagatccggtgatggtaacatcttcatcaag
aacttgcacccagctattgacaacaaggctttacacgacaccttctctgctttcggtaag
attttgtcctgtaaggttgctaccgatgacatgggtcaatccaagtgttttggtttcgtt
cactatgaaactgccgaagctgctgaggccgctattgaaaacgtcaacggtatgttgttg
aatgaccgtgaagtttacgttggtaagcacatctccaagaaggaccgtgaatccaagttt
gaagaaatgaaggccaactacaccaacatttacgtcaagaacattgatttggaattctcc
gatgaagaatttgaaaagttgtttgttccattcggtactatcacctccatctacttggaa
aaggaccaagatggtaagtccaagggttttggtttcgtcaactacgaaacccacgaatct
gcagtcaaggccgttgaggaattaaacgacaaggaaatcaatggtcaaaagatttacgtt
ggtagagcccaaaagaagagagaaagaatggaagaattgaagaagcaatacgaatccacc
agagttgaaagattatctaaataccaaggtgtcaacttgtttgtcaagaacttggatgac
tctattgattccgaaaaattagaagaagaattcaagccatttggttccatcacttctgcc
aaggtcatggttgacgaagctggtaagtccaagggctttggtttcgtttgtttctcctcc
ccagaagaagccaccaaggctattactgaaatgaaccaaagaatgatcttgggcaagcca
ttatacgttgctttagctcaacgtaaggatgttagacgttctcaattggaacaacaaatc
caagctagaaaccaaatgagaatgcaaaatgctgctgcctctggtggtattccaggtcaa
ttcatccccccaatgttttacggtcaacaaggtttcttcccacctaacggtagaggtaac
gctccattcccaggtccaaacccacaaatgatgatgagaagaggacaacaattcccaggt
ccagaacaatggccaagaccaggaccaaacggtcaaccagttccagtttacggtatccca
cctcaattccaagatttcaatggtcaaccaatgagacaacaacaaagaggtggttactat
ccaaaccgtaaccaaaacaagggtggtcgtcaacaaaaggacttggctgccatcattgcc
aatgctccacctgaccaacaaaagagaatcttgggtgaagaattgtacccaaagattgtt
gctactggtaaggctcaagaaccagaagctgccggtaagatcactggtatgatgttgggc
ttggaaaaccaagaaattttggatttattagaagatgatgaattgtttaacaaccacttt
gaagatgctttgactgcttttgaagaatacaagaagtctgaagctggtgctccagctcca
gctgctccagagcaaccacaagcttaa
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integrated database retrieval system
