KEGG   Spathaspora passalidarum: SPAPADRAFT_58412
Entry
SPAPADRAFT_58412  CDS       T03101                                 
Name
(RefSeq) member of Set1p complex, histone methyl transferase
  KO
K14962  COMPASS component SWD2
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPAPADRAFT_58412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spaa03019]
    SPAPADRAFT_58412
   03036 Chromosome and associated proteins [BR:spaa03036]
    SPAPADRAFT_58412
Messenger RNA biogenesis [BR:spaa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SPAPADRAFT_58412
Chromosome and associated proteins [BR:spaa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     SPAPADRAFT_58412
    COMPASS/SET1 complex (yeast)
     SPAPADRAFT_58412
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 18872442
NCBI-ProteinID: XP_007372624
JGI: 58412
UniProt: G3AG73
LinkDB
Position
Unknown
AA seq 361 aa
MSVNAVNSKFIASSSSTVQVTEKVLASCRPAKLFDYHQGATISSLDFDDSGQYLISSGID
KSIQLYDCHKGVHKGDIQSQKYGAHSARFTHSDLNCLYASTPTEPQENEHAIRYLSLSNN
QYLRYFKGHKRQVSSIEVNPIHDTFISSSFDGTVKLWDLKSSSPTGNIEVGQNSVVGFDP
QGVVFAIGKYPGAESSTGILSIYDLKSFDKGPFLQVEIPTLQGQLWNSIEFSNNGKHILI
STDSCQHYIVDSFSGHVQAIIQLASPTPNKWMSFKYPYTGCCTFSPCGKFVLAGSPKSVV
HIFDISNLKSAKGAPTDPVILTNSITKLNSTTGIPKILAFNPKLLTFATADTTVTLWSPS
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtctgtaaatgcagtcaattcgaagtttatagcgtcgtcatcatctacagttcaagtg
actgagaaagttctagcgtcttgtagaccagcaaaattgtttgattaccatcaaggtgct
acaatctcttcacttgatttcgatgactctgggcaatacttgatttcttcgggaattgac
aaatctattcaactatacgactgtcataaaggtgtacataagggagatatacaatctcag
aaatatggcgcgcattctgctaggtttacccattcggatttaaattgtttgtacgcatca
acaccaaccgaaccacaggaaaatgagcatgccataagatacctttcgctatcaaataat
caatacttacgatatttcaaaggtcacaaacgacaagttagttcaattgaagtgaacccg
attcatgacacatttataagttcgagttttgacggaactgtaaaattatgggacttgaaa
agttcatctccaacaggaaatattgaagttggacaaaattccgtggttggatttgacccg
caaggtgttgtttttgcaattgggaaatatcctggtgctgaatcttcaacgggaatattg
agcatctatgatttaaaaagcttcgacaagggaccatttttacaagtggaaataccaact
ttacaaggacaactttggaatagcatagaattttccaacaatgggaaacatatattaatt
tcaaccgattcatgccaacattatattgttgactcgttcctgggtcatgtacaagcaata
attcaattagccagcccaactcctaataagtggatgtcgtttaagtatccatacactgga
tgttgcactttctcaccgtgtgggaaatttgttctcgcaggtagtcctaagtctgttgtc
cacatttttgatatcagcaatttgaaatctgctaaaggtgcaccaacggatccagtaata
ctcaccaattcgattactaagttgaatagtacgaccgggattccaaaaatcttagcgttc
aatccaaagttgttgacttttgcaacagcagatacaaccgtgactctttggctgccaagt
gggtaa

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