Spathaspora passalidarum: SPAPADRAFT_58648
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Entry
SPAPADRAFT_58648 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAPADRAFT_58648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaa03021
]
SPAPADRAFT_58648
Transcription machinery [BR:
spaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SPAPADRAFT_58648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Ge1_WD40
Vac7
Motif
Other DBs
NCBI-GeneID:
18872552
NCBI-ProteinID:
XP_007372840
JGI:
58648
UniProt:
G3AGU6
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MKFISKQDVDIVDNFVKPVRLHRKDPRNIQFHLTRRELDIRKRENEELKREKQEQQDGEV
PAENNGEVAPDKPMVTPGGANLAQVAPDGGARKQKKNLFKRKTRQINLMDDAKRKLRYEE
HYPWVIEDYDGKNVFVGNYEAGSSESQHVLFVFDKDGFKMVPAEKVYRFTPRNKYATLTL
EEAEAKMERNATVPRWLMKHMEDRSTSDTIPDQRFRNSSAANGGSTFNRAIQPGPSSSRP
RLRTVIGGSASRESNDRDSDHDDLDYDEEFADDEEAPIMDGDEEENKLSERKIKKEMLKA
AHFDGKSDVEGDLDDLDDLFETEKTRKVDKEGKKLRKVLNKREGGVYDDDDDDEEGLLPY
LSKSDLESNDESDDEDEVVVKKEDEVKLENNQTAQHYHRTIYVHHIDSGYVTIKAPASFL
STLPKGEWNPQVRRRPTPDITSPKKKIKLEEKSESPLTDIAASPTKSPSPIDTATTTTTT
TTTTTTIDLNSSGPDNVLVTVNDVLDIVRNNPLTTKELLVGLKSRVSAHKDNKQRIITIV
KQNLKLVDGKLVLKE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatctccaagcaggatgttgacattgttgataactttgtgaagccggtgagg
ttacatcggaaggatccccggaatatccagttccatctaacgagacgcgagttggatatc
aggaaacgcgagaatgaggagcttaaacgggaaaaacaagagcagcaagatggggaagtc
ccagcggagaataatggtgaggttgcgcccgacaaaccgatggttactcctgggggagct
aacttggcccaggttgctcctgacggtggtgctcgtaaacaaaagaagaatctattcaag
aggaaaacccgtcagattaaccttatggatgacgccaagaggaaacttcggtacgaggag
cattacccctgggtcattgaggattacgatgggaaaaatgtgtttgtggggaactatgaa
gctggttcctccgaatctcagcatgtattatttgtatttgacaaagatggattcaaaatg
gttccggctgaaaaagtatatcgattcacaccaagaaataaatatgctactttgacattg
gaagaagcggaggcaaaaatggaaagaaatgccactgttcctagatggttaatgaaacat
atggaagacagactgactctggatactattcctgatcaaagatttagaaattctagtgct
gccaatggaggcagtacttttaatagagccatacaaccgggaccttcaagttcaagacca
agattgcgaactgtcattggtggtagtgccagtcgtgaatctaacgatcgtgattctgat
catgacgatttggattacgatgaagaatttgctgatgatgaagaagcaccaatcatggat
ggggatgaagaagagaataaactttcggaacggaaaattaaaaaggaaatgcttaaagca
gcccatttcgatgggaagtcggatgttgaaggtgatttggatgatttggatgatttattc
gaaactgaaaagacaagaaaggtggataaagaaggaaagaaattacggaaggtgttgaat
aaacgagaaggtggagtttatgacgatgacgacgatgatgaagaagggttattaccatac
ttatctaaatctgatttagaaagtaatgatgaatcagatgacgaggatgaggttgttgtt
aaaaaggaagatgaagtcaagcttgaaaacaatcaaactgcccaacattatcatcgtacc
atatatgttcatcacatagattctgggtatgtcacgatcaaagcaccagcatcattcttg
tctacacttcctaaaggagaatggaatcctcaagttcgtcgtaggccaactccagatatc
acttcgcctaaaaagaagattaaattagaagaaaagtcagaatctccattaacggatatt
gctgcatcacctaccaagtcaccatcaccaattgatacagcaacaacaacaacaacaaca
acaacaacaacaacaactatagaccttaattcatcgggtcctgacaatgtcctagtcacc
gtgaatgatgttttggatattgttcgtaataatccattaaccactaaagagctattggtt
gggttaaagagtagggttagtgctcacaaagataacaaacaaagaatcattactattgtt
aaacaaaacttgaaattggttgatgggaaattagtccttaaagaataa
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