Spathaspora passalidarum: SPAPADRAFT_58752
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Entry
SPAPADRAFT_58752 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K18717
nucleoporin ASM4
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_58752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_58752
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAPADRAFT_58752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
18872590
NCBI-ProteinID:
XP_007372932
JGI:
58752
UniProt:
G3AH90
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MSLFTQSTSLNPTINPSVQQQPVQQPQQQQQVSTPVANNSWYTQNQKKRTIPNHLIPKKK
PGFQITASTTSKKKSSKSPTTSSGLLLGDSHQFNMLSFGNQQRKTISSGIFDDDDTTIDN
SEEGNSLLVYQDDLPPNKSLFELNEKVNKPIDQIDSFINKDPRKFSNLFNKNEEVEPVPV
VKPENQLSHSESAILVFGYPESLSNQVIQLFKQFGDILEDFQINKTKSLYTTQANNKVVP
IFSGPNWVKITYDNPTSAIEALQENGTVFNGVLLGVIPYHKSALENLQKRSLIDKENIGE
MNLNIQLPAQESESKSSDVAPPTTDPYNARLDIKEGKQFFVAPEGTELKKPNNSERLSWI
GTISKYVFGFHDL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttcacacaatctacatcgttgaatccaacgatcaatccaagtgtccaacag
caaccagtacaacaaccacaacagcaacaacaagtatcaaccccagtagctaacaactct
tggtacactcagaatcaaaagaagcgaaccattcccaaccacttgatccccaaaaagaaa
cccggattccaaatcacagcctctactacatccaaaaagaaatcctctaaatcaccaact
acatccagtggattattgctcggagatagtcaccaattcaatatgttgtcctttggaaat
caacaacgaaagactataagttcaggaatatttgatgatgacgacaccaccatcgacaat
agtgaagaaggtaatagcttgctagtataccaagatgatttacctcctaataagtccttg
tttgaattgaatgaaaaggtcaataagccaattgaccagatcgattcgtttataaataaa
gacccaagaaagtttagtaacttgttcaacaagaatgaagaagtcgagcctgttccagta
gttaaacctgaaaatcaattatcccactcggaatcagctatcttggtatttggatacccg
gaatccttgtctaaccaagtcatccaattgtttaagcaattcggagacattttagaagat
ttccaaatcaacaagaccaaatcattatataccactcaagcaaacaacaaggtggtccca
atattcagtggtccaaattgggtcaaaatcacatacgataacccaacttcagcaattgaa
gccttgcaagaaaatggtactgtgtttaacggagtattgttgggagtcataccttatcat
aaatcagcattggagaatttacaaaagagaagcttgattgacaaggaaaacattggagaa
atgaacttgaacattcaattaccagctcaagaaagtgaaagtaagtccagtgatgtagct
ccacctaccactgatccatacaatgcccgtcttgacattaaagaaggcaaacaattcttt
gttgccccagaaggaacagaattaaagaaaccaaacaatagcgaaaggttatcctggata
ggtacaatttccaaatatgtgtttggattccatgatttatag
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