Spathaspora passalidarum: SPAPADRAFT_58923
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Entry
SPAPADRAFT_58923 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03020
RNA polymerase
spaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPAPADRAFT_58923
09124 Replication and repair
03420 Nucleotide excision repair
SPAPADRAFT_58923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaa03021
]
SPAPADRAFT_58923
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_58923
Transcription machinery [BR:
spaa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SPAPADRAFT_58923
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SPAPADRAFT_58923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18872681
NCBI-ProteinID:
XP_007373137
JGI:
58923
UniProt:
G3AED7
LinkDB
All DBs
Position
Unknown
AA seq
302 aa
AA seq
DB search
MNMDIDTSGPSVTIREAERDHVNFILKNVSLASANSIRRTMLAEVPTLAIDLVEIDVNTS
VLADEFIAHRLGLIPLVSEGIENLTYSRDCTCDNYCSKCSVRLELTAKCDSDSTMSVYAS
DLAKFHNGSRLGDPVIRDAQGRGSLICKLRKHQELRIVCIAKKGIAKEHAKWSPCAAVGF
EYDPWNKLKHTDYWYEIDADKEWPKSENCEWEEMPDPEAPFDYTAKPTNFYFDVETVGNL
PPNEVVVRSIETLQRKLADIAIELNKESVEASNANAGGFTTYGRDYDGDSPMGRTPYGEW
GQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggatatcgacactagtggaccctcggtgactatccgagaagccgagagagac
catgtgaacttcattctcaaaaatgtcagtcttgccctggcaaactctatccgacgcacc
atgcttgccgaagtgccaacccttgccatcgacttggtggaaatagacgtcaacaccagt
gtgttggccgatgaattcatcgcccatagactcggattgattccgcttgtcagtgagggc
attgaaaacttgacatattccagagactgcacctgtgataactactgtagcaaatgttct
gtccgattagaacttactgccaagtgtgatagtgactccaccatgagtgtatatgcatcc
gatttggctaaattccataacgggtccagattgggtgacccggtcattagagatgcccaa
ggaagaggctcgctcatctgtaaattaagaaaacatcaagagcttagaattgtgtgtatt
gccaaaaaggggattgctaaagaacacgccaaatggtcgccttgtgctgcagtggggttt
gaatatgatccatggaataaattaaagcatacagattactggtatgaaattgacgccgac
aaggaatggcccaagctggaaaactgtgaatgggaagaaatgcccgatccagaagctcca
tttgattatactgccaagccaactaatttctatttcgatgtggaaaccgtgggtaacttg
cctcctaatgaagtagtggttaggctgattgaaactttgcaaagaaaattggccgatatc
gctatcgaattgaataaagagagcgtggaagccagtaatgctaatgcaggtgggtttact
acttacggaagagattatgatggtgattctcccatgggtagaactccatacggggaatgg
ggacagtag
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