KEGG   Spathaspora passalidarum: SPAPADRAFT_58923
Entry
SPAPADRAFT_58923  CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03020  RNA polymerase
spaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPAPADRAFT_58923
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPAPADRAFT_58923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spaa03021]
    SPAPADRAFT_58923
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_58923
Transcription machinery [BR:spaa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     SPAPADRAFT_58923
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SPAPADRAFT_58923
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 18872681
NCBI-ProteinID: XP_007373137
JGI: 58923
UniProt: G3AED7
LinkDB
Position
Unknown
AA seq 302 aa
MNMDIDTSGPSVTIREAERDHVNFILKNVSLASANSIRRTMLAEVPTLAIDLVEIDVNTS
VLADEFIAHRLGLIPLVSEGIENLTYSRDCTCDNYCSKCSVRLELTAKCDSDSTMSVYAS
DLAKFHNGSRLGDPVIRDAQGRGSLICKLRKHQELRIVCIAKKGIAKEHAKWSPCAAVGF
EYDPWNKLKHTDYWYEIDADKEWPKSENCEWEEMPDPEAPFDYTAKPTNFYFDVETVGNL
PPNEVVVRSIETLQRKLADIAIELNKESVEASNANAGGFTTYGRDYDGDSPMGRTPYGEW
GQ
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaacatggatatcgacactagtggaccctcggtgactatccgagaagccgagagagac
catgtgaacttcattctcaaaaatgtcagtcttgccctggcaaactctatccgacgcacc
atgcttgccgaagtgccaacccttgccatcgacttggtggaaatagacgtcaacaccagt
gtgttggccgatgaattcatcgcccatagactcggattgattccgcttgtcagtgagggc
attgaaaacttgacatattccagagactgcacctgtgataactactgtagcaaatgttct
gtccgattagaacttactgccaagtgtgatagtgactccaccatgagtgtatatgcatcc
gatttggctaaattccataacgggtccagattgggtgacccggtcattagagatgcccaa
ggaagaggctcgctcatctgtaaattaagaaaacatcaagagcttagaattgtgtgtatt
gccaaaaaggggattgctaaagaacacgccaaatggtcgccttgtgctgcagtggggttt
gaatatgatccatggaataaattaaagcatacagattactggtatgaaattgacgccgac
aaggaatggcccaagctggaaaactgtgaatgggaagaaatgcccgatccagaagctcca
tttgattatactgccaagccaactaatttctatttcgatgtggaaaccgtgggtaacttg
cctcctaatgaagtagtggttaggctgattgaaactttgcaaagaaaattggccgatatc
gctatcgaattgaataaagagagcgtggaagccagtaatgctaatgcaggtgggtttact
acttacggaagagattatgatggtgattctcccatgggtagaactccatacggggaatgg
ggacagtag

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