Spathaspora passalidarum: SPAPADRAFT_59082
Help
Entry
SPAPADRAFT_59082 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAPADRAFT_59082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_59082
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAPADRAFT_59082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_1st
DSE1_N
Beta-prop_IFT140_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_VPS8
DUF5074
WD40
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
PDF2_C
Motif
Other DBs
NCBI-GeneID:
18872764
NCBI-ProteinID:
XP_007373302
JGI:
59082
UniProt:
G3AIK3
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MSSSGPIICSSFDPSNGYLATALVALDTHQIKVQSVNPSQSSLNASFNLDKANKITQLQW
INSSVQLLAVCLTKGSILVYSPQTNEIVAELTSSANVSITDFHYSKTTHTGWSSDIEGNV
YEWNMDSYTLIQSFKIGDVIEGVDSINRISTIVYNGQVHLLLGSHAIYLVDAGNKRMVKT
FPGHIQPVNSLVPVPDHPELFLTSAKGDRFVNLYSVDKVTTKAVFVSSSSVLEISVGIRN
DKSILVAINENGNLEVFNDPLSDSNNTTTTTPKKKKRKQPQGTTSRSSNAAIKLSRPEPE
IKSPQDSNLRINSISINDDSVLFTWLENSSIPFFDSVQWIDETGKFSLESQTISKARPDL
KTTQHTVSGHDVAAAKLYSEGHAIVSDGTNIRDLDKDDEDEGEESEQEESLAEKLDRLAM
DKPKPAKKKLEDARTGASLAVILSQSLKNNDQSLLETVLTNRDPQIIQNTISRLNPYLAV
VLLDRLSEKIQRQSSRFDQLNYWLKWILVIHGAVIASLPNLSVKLSSLHSVLIKKADTMP
RLLELQGRLNMLYEQNELKNELLTEEYQDEDHAGESDVEYIEELDDAQFNGEIDEDELME
FEGEDDYIESEDEEEEEEEDDDGDIPAVADLDEHSDLEIDA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatctggtccgataatctgttcactgtttgatcctagtaatggatacctagcc
accgcgcttgtcgccttggacacgcaccagatcaaggtgcaatccgtcaacccatctcaa
tcgtcattaaatgcatccttcaacttagacaaagcaaacaagataacccagttgcaatgg
ataaactccagtgttcaactcttggccgtgtgtttgaccaagggatccattcttgtttat
tcaccccaaaccaacgagattgtggccgaattgaccagcagcgcaaatgtatccataact
gattttcactattcgaaaactacccatactggatggtcctctgacatagaaggcaatgtg
tatgaatggaacatggactcatacacccttatccaaagtttcaaaatcggcgacgtgatt
gaaggtgtcgactccataaatcgaatttctaccattgtatacaatggccaagtgcactta
ttattaggatctcatgcgatctacttggtggacgcaggaaacaagagaatggtaaagaca
ttccccggccacatacaaccagtgaatagtctcgttccagttcccgaccacccagaattg
ttcttgactagcgccaagggagaccggtttgtcaatttgtacctggtggataaagtaacc
accaaggctgtgtttgtgtcgctgtcgtccgtattggagatatctgtcgggatcagaaac
gacaagtcgatattagttgctataaacgaaaacgggaacttggaagtgtttaacgaccca
ttgtccgacagcaacaacaccaccaccaccacaccaaagaagaaaaagagaaagcaacca
caaggaacaacatctcgttcatccaacgccgccatcaaattatcccgtcccgaaccagaa
atcaaaagtccccaggactcaaatttgcgcatcaactccatatccatcaacgacgactcc
gtattgttcacatggttggaaaattcatccatcccgttctttgacagcgtgcaatggata
gacgaaaccggaaagttcagccttgaatcgcaaacaatttcaaaggccagaccagactta
aaaaccacccaacatacagtgtccgggcacgacgttgccgccgctaaactctatagcgag
ggccacgccatcgtcagtgacggaaccaacatccgcgacttagacaaggacgatgaagat
gaaggagaagaaagcgagcaagaagaatctctcgctgaaaaattggaccgattggccatg
gacaaacccaaaccagccaagaagaaactcgaagacgcaagaaccggggcatctcttgct
gtgattctttcccaatcgctcaagaataacgatcaaagtttgctcgaaaccgtgttgacc
aatcgtgatccccaaatcatccaaaataccatctccagattgaatccgtatttagctgtg
gtgttgttggacagattgagtgaaaagattcaacgtcaatcttcaaggttcgaccagttg
aactactggctcaagtggattcttgtcatccatggtgcagtcattgcttctttacctaac
cttagtgtcaagttgtccagtttacactcggtcttgatcaagaaggccgataccatgcca
aggttgttggaattgcaagggaggttaaacatgttgtatgaacagaatgaattgaagaat
gagcttttgaccgaagagtaccaagacgaagaccatgctggtgagagtgatgttgaatac
attgaagaactcgatgatgcccaattcaatggggaaatcgacgaggatgaactcatggag
tttgaaggagaagatgactacatagaaagcgaagacgaagaggaggaggaagaagaagat
gacgatggggacatcccagcagtggctgatttggatgaacacagtgatctagaaatcgac
gcatag
DBGET
integrated database retrieval system