Spathaspora passalidarum: SPAPADRAFT_59397
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Entry
SPAPADRAFT_59397 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAPADRAFT_59397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_59397
03110 Chaperones and folding catalysts [BR:
spaa03110
]
SPAPADRAFT_59397
03029 Mitochondrial biogenesis [BR:
spaa03029
]
SPAPADRAFT_59397
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spaa04147
]
SPAPADRAFT_59397
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SPAPADRAFT_59397
Messenger RNA biogenesis [BR:
spaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SPAPADRAFT_59397
Chaperones and folding catalysts [BR:
spaa03110
]
Heat shock proteins
HSP60 / Chaperonin
SPAPADRAFT_59397
Mitochondrial biogenesis [BR:
spaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SPAPADRAFT_59397
Exosome [BR:
spaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPAPADRAFT_59397
Exosomal proteins of other body fluids (saliva and urine)
SPAPADRAFT_59397
Exosomal proteins of breast cancer cells
SPAPADRAFT_59397
Exosomal proteins of colorectal cancer cells
SPAPADRAFT_59397
Exosomal proteins of bladder cancer cells
SPAPADRAFT_59397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
18872897
NCBI-ProteinID:
XP_007373572
JGI:
59397
UniProt:
G3AJT7
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MLRANQSSIKRVSTTFVRHLHKELKFGVEGRAALLKGVNTLADAVSVTLGPKGRNVLIEQ
QFGSPKITKDGVTVAKAVTLPDKFEDMGAKLLQEVASRTNESAGDGTTSATILGRSIFTE
SVKNVAAGCNPMDLRRGSQAAVEAVIDFLQQNKKEITTSAEIAQVATISANGDHHIGALL
ASAMEKVGKEGVITVKEGKTLVDELEVTEGMKFDRGFISPYFITNTKTGKVEFENPLVLL
SEKKISSIQDILPSLELSNQSRRPLLIVAEDVDGEALAACILNKLRGQVQVCAVKAPGFG
DNRKNTLGDIAVLTGGTVFTEELDIKPENATLELLGSAGSITVTKEDTVILNGEGSKDNI
ATRCEQIRTTIDDATTTEYEKEKLQERLAKLSGGVAVVRVGGSSEVEVGEKKDRYDDALN
ATRAAVQEGILPGGGTALIKATKILDGVKDKAANFDQKLGVEIIRSAITKPAKRIIENAG
EEGAVIVGKIYDEPSFTYGYDSQKGEFTDMIAAGIIDPFKVVKNGLNDAAGIASLLATTE
CAIVDAPEPKAPAGAPPAGGMGGMPGMF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgttaagagctaaccaatcatcaatcaagagagtctccaccacctttgttcgtcattta
cacaaggaattaaagtttggtgttgaaggtagagccgccttattaaagggtgtcaacacc
ttggccgatgccgtttccgtcactcttggtccaaagggtcgtaatgttttaattgaacaa
caattcggctccccaaaaatcaccaaggacggtgtcaccgttgccaaggctgttaccttg
ccagacaagtttgaagacatgggtgccaagttattacaagaagttgcatccagaaccaac
gaaagtgctggtgatggtaccacttctgctactattttaggtagatccatcttcactgaa
tccgtcaagaacgttgctgctggttgtaacccaatggatttaagaagaggtagtcaagct
gccgttgaagccgtcattgactttttacaacaaaacaagaaggaaatcaccacctctgct
gaaattgctcaagttgctactatttctgccaacggtgaccaccatattggtgctttatta
gcttctgctatggaaaaggttggtaaggaaggtgttatcaccgtcaaggaaggtaagacc
ttggttgacgaattggaagtcactgaaggtatgaagttcgaccgtggtttcatttctcca
tactttatcaccaacaccaagaccggtaaggttgaatttgaaaacccattggttttgctt
tctgaaaagaagatttctagtatccaagacattttaccatccttggaattgtccaaccaa
tcaagaagaccattattgattgttgccgaagatgtcgatggtgaagctttagctgcttgt
atcttgaacaaattgagaggtcaagttcaagtttgtgctgtcaaggctccaggtttcggt
gataacagaaagaacaccttgggtgatattgctgttcttaccggtggtaccgtcttcact
gaagaattggacatcaagccagaaaatgccactcttgaattattgggttctgctggttcc
attaccgttaccaaagaagacactgttatcttgaatggtgaaggttctaaagacaacatt
gctaccagatgtgaacaaattagaaccaccattgacgatgccaccaccactgaatatgaa
aaggaaaagttacaagaaagattagccaaattatctggaggtgttgctgttgttagagtt
ggtggttcttctgaagttgaagttggtgaaaagaaggatcgttatgatgatgctcttaac
gccaccagagctgctgttcaagaaggtatcttaccaggtggtggtactgctttaatcaag
gccaccaagatcttggatggtgttaaggacaaggctgctaactttgaccaaaagttaggg
gttgaaatcattagatctgccattaccaagccagccaagagaattattgaaaatgctggt
gaagaaggtgctgttattgtcggtaagatttacgacgaaccaagtttcacctatggttac
gattcccaaaagggtgaattcaccgatatgatcgccgctggtatcattgatccattcaag
gttgtcaagaacggattaaatgatgctgctggtattgcttcattgttggccactactgaa
tgtgctattgttgatgctccagaaccaaaggctccagctggagcaccaccagctggtggt
atgggtggtatgccaggtatgttctaa
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