Spathaspora passalidarum: SPAPADRAFT_59734
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Entry
SPAPADRAFT_59734 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPAPADRAFT_59734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_59734
Enzymes [BR:
spaa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
SPAPADRAFT_59734
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
SPAPADRAFT_59734
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
SPAPADRAFT_59734
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
SPAPADRAFT_59734
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
SPAPADRAFT_59734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
HIT
DUF7326
Motif
Other DBs
NCBI-GeneID:
18873054
NCBI-ProteinID:
XP_007373901
JGI:
59734
UniProt:
G3AI03
LinkDB
All DBs
Position
Unknown
AA seq
168 aa
AA seq
DB search
MSFRDAFQPYIDNPGKYKDLVIFHDENVIIIKDMYPKAIRHLLVIPRNTLVSKKHPLDAF
NTNYPEFTGEELYESISRYVEKAKDIIIKDLQEKFQVNAQSLTEFRNTFINAGVHSIPSL
NNLHVHVITQDFHSPKLKNKKHYNSFTTKFFVPFDELNPIYNEKYYKL
NT seq
505 nt
NT seq
+upstream
nt +downstream
nt
atgagttttagagacgcattccaaccgtatatagataatcccgggaagtataaggacctt
gttattttccatgatgaaaatgtaatcatcattaaggatatgtatcctaaggcaatcaga
catttactagtgattcctcgtaatacactcgtctccaagaagcatccattggatgcattc
aataccaattaccctgaatttacaggagaagagttgtatgagtctatcagcagatatgtg
gaaaaggcaaaagatataataatcaaggacttgcaagagaagtttcaagtgaatgcgcaa
tctttaactgaattcagaaacacatttataaatgctggcgtccattcaataccgtctttg
aataatttacatgttcatgtaataacccaagattttcattctccgaaattgaaaaataaa
aagcattataattcattcaccaccaaattctttgttccctttgacgaattgaatccgata
tataatgaaaaatattataaattaa
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