Spathaspora passalidarum: SPAPADRAFT_60820
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Entry
SPAPADRAFT_60820 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_60820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_60820
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAPADRAFT_60820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
NUP58_M
Mdt30
DegS
Motif
Other DBs
NCBI-GeneID:
18873588
NCBI-ProteinID:
XP_007374985
JGI:
60820
UniProt:
G3AMM6
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
LFGAKKDDDKPAATTGGFSFGAKKDDDKPAATTGGFSFGAKKDDDKPAATTGGFSFGAKK
DDDKPASSGLFGAKKDEDKPAASGTTPSLTFGTKPDEKKDDSKPATAGSIAPTATTATTS
VQPNLKPTKIEPIPVSIDNKTLDDLIIKWSKQLSTTSKIFNSYTEKDSLEAEATQSKIDQ
HLLFVENQQDELEKLLDNYEQQADILLNNIELNNNSAAANATAVMQSADAAAAAASTNGA
SAAAAAAAAAAAANSNNSSLSVTDKLREKAYHNAELLDERLDNLGENLSTLINEINSVSD
VFNKNLINDLAEGNSGATTGSSDEKSLQKTSKGGENPVEEIVKLLNLHLENLKYIESTEE
DLKKKLDKLSKTKKSHY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttatttggagctaagaaagatgatgacaaacctgctgcgactactggtggtttctcattc
ggtgcaaagaaagatgatgacaaacctgctgcaactactggtggtttctcattcggtgca
aagaaagatgatgacaaacctgctgcaactactggtggtttctcatttggtgccaaaaag
gatgatgataagccagcttcttcagggttatttggagctaagaaagatgaggataagcca
gctgcttcaggtacaactccaagtttaacgtttggcactaaacctgatgaaaagaaagac
gatagtaaacctgccacggctggttctattgcacccactgctactactgctacaacgtca
gttcaaccaaacttgaagccaacaaagattgaacctattccagtatccattgataataag
acattagatgatttgattataaaatggtccaagcaattatccacaactagtaaaatattt
aattcctatactgaaaaagactcacttgaagcagaagctacacaatctaagatcgatcaa
cacttgttatttgtcgaaaaccaacaagatgaattagagaagttgttggataactatgaa
caacaggctgatattttgttgaataacattgaattgaataataattcagctgctgctaat
gctactgcagtaatgcaatccgctgatgcagcagctgctgctgcatctactaatggtgct
tccgcggctgcggctgccgcggctgctgctgctgctgcaaattcaaataatagttcttta
agtgttactgataaattacgagaaaaggcttatcataatgctgaattgttggatgaaaga
ttggataatttgggtgagaatttgagcacattgatcaatgaaatcaattcagttagcgat
gtatttaacaagaatttgataaatgatttggcagaaggtaattctggtgccactactgga
tcatccgatgaaaaatcattgcaaaagacttcaaagggaggggaaaatccagttgaagaa
attgtcaaattgttgaatttacatttagaaaatttgaagtacattgaatcaactgaagaa
gatttgaagaagaaattagacaagctttccaagaccaaaaaatcacactattag
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