KEGG   Spathaspora passalidarum: SPAPADRAFT_60975
Entry
SPAPADRAFT_60975  CDS       T03101                                 
Name
(RefSeq) DNA replication factor C
  KO
K10756  replication factor C subunit 3/5
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03030  DNA replication
spaa03410  Base excision repair
spaa03420  Nucleotide excision repair
spaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPAPADRAFT_60975
   03410 Base excision repair
    SPAPADRAFT_60975
   03420 Nucleotide excision repair
    SPAPADRAFT_60975
   03430 Mismatch repair
    SPAPADRAFT_60975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spaa03032]
    SPAPADRAFT_60975
   03036 Chromosome and associated proteins [BR:spaa03036]
    SPAPADRAFT_60975
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_60975
DNA replication proteins [BR:spaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPAPADRAFT_60975
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPAPADRAFT_60975
Chromosome and associated proteins [BR:spaa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPAPADRAFT_60975
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPAPADRAFT_60975
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPAPADRAFT_60975
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_22 MTC2_N AAA_lid_RFC1
Other DBs
NCBI-GeneID: 18873665
NCBI-ProteinID: XP_007375157
JGI: 60975
UniProt: G3AKU2
LinkDB
Position
Unknown
AA seq 360 aa
MSLWVDKYRPKTLDQLLYHDSITQSLKALSKSGDFPHLLIYGPSGAGKKTRIYCTLNEIF
GSSVEKLKIDVKTFVTSSNRKLEFNVLSSPYHLEITPSDMGNNDRVVIQDLLKDIASTEQ
VDFNNQSSSKTKHRFKIVIINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAP
IKSRTLLVRIPSPSITDINSILSNISVKEGIKFSSNDLEPFYTKVSTASNRNLRRALLSF
ETLTMQNETIKPETNLSIINLDWEVIIKNIANNIKTARNVATLAKIRTVFYELLSHCIPA
RIILKTLLFNLIEIIPDVRVVQELVNLASVFDERLSLGQKSIFHLEGFVAKSMVTIDQYN
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtcgttgtgggtagacaaatatcgtccgaaaactctagatcaattgttatatcatgac
tctataactcaaagcttgaaggcattatctaaatcaggtgattttcctcacttgttaatc
tatggaccaagtggagcaggtaaaaagacaagaatatattgtactttgaatgaaatcttt
ggatccctggttgaaaaattaaagattgatgttaaaacatttgttacttcttctaataga
aagttagaattcaacgtgttgagttctccttatcatttggagattactccttccgatatg
ggtaacaatgatcgtgtggttattcaagatttgttaaaggacattgcatcaactgaacaa
gttgatttcaataatcaaagttcgtccaagaccaaacacagattcaagattgttatcatc
aatgaagcagattcgttaagtagggatgcacaagccgcattaagaagaaccatggaaaag
tattcatctaatatcagattaatcttggtttgcaactcgatctccaacattattgctcca
atcaagtcaagaactcttttagtgagaattccaagtccttccattactgatatcaattcc
atcttgtctaatatttccgtcaaagaaggtattaagttcagttctaatgaccttgaacca
ttctacaccaaagtttctactgctagtaatcgaaatttgagaagagctttattaagtttt
gaaactttgactatgcaaaatgaaactattaagccagaaactaacctttcaattattaat
ttagattgggaagttataataaagaacattgccaataacatcaaaaccgctagaaatgtt
gctactttggccaaaataagaacagtattctatgagcttttatcgcattgtattcctgcc
agaattattttgaaaaccttattgtttaatttgattgagattattcctgatgttagagtt
gtgcaagaattggttaatttagcctcagtatttgatgaaaggttaagtttgggacaaaag
agtattttccatttagaaggttttgttgcaaaatcaatggtaactattgatcaatataat
taa

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