KEGG   Spathaspora passalidarum: SPAPADRAFT_61256
Entry
SPAPADRAFT_61256  CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03018  RNA degradation
spaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAPADRAFT_61256
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPAPADRAFT_61256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spaa03019]
    SPAPADRAFT_61256
   03041 Spliceosome [BR:spaa03041]
    SPAPADRAFT_61256
Messenger RNA biogenesis [BR:spaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPAPADRAFT_61256
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SPAPADRAFT_61256
Spliceosome [BR:spaa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SPAPADRAFT_61256
SSDB
Motif
Pfam: LSM Hfq O-FucT Med3
Other DBs
NCBI-GeneID: 18873799
NCBI-ProteinID: XP_007375442
JGI: 61256
UniProt: G3APJ5
LinkDB
Position
Unknown
AA seq 129 aa
MSAQQTQQQPQGQQQEQKQHRRRNNQTPKQEGPKREAILDLNKYKHQEIKVKFVGGRQIT
GVLKGFDQLMNLVLENVKEQLRDPEDDTVLTKETRDLGLVVVRCTSLLTISPVNGFEIIE
NPFVQPQEQ
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtcagcacaacaaacacaacaacagccccagggccaacagcaagaacaaaagcaacat
agaagaagaaataatcaaacaccaaaacaagaaggacctaaaagagaagccattttagac
ttaaacaaatataaacaccaagaaatcaaagttaaattcgtcggtggaagacaaatcacc
ggagtccttaaaggatttgatcaattaatgaatttagtattagaaaatgtcaaagaacaa
cttagagaccctgaagatgatactgtattaaccaaagaaactcgtgatcttggcttagtt
gtggttagatgcacttccttgttaaccatttccccagttaacgggtttgaaattattgag
aatccatttgtacaaccacaagaacaatag

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