KEGG   Spathaspora passalidarum: SPAPADRAFT_61389
Entry
SPAPADRAFT_61389  CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03013  Nucleocytoplasmic transport
spaa03015  mRNA surveillance pathway
spaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAPADRAFT_61389
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPAPADRAFT_61389
   03015 mRNA surveillance pathway
    SPAPADRAFT_61389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spaa03019]
    SPAPADRAFT_61389
   03041 Spliceosome [BR:spaa03041]
    SPAPADRAFT_61389
Messenger RNA biogenesis [BR:spaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SPAPADRAFT_61389
    TREX complex
     SPAPADRAFT_61389
Spliceosome [BR:spaa03041]
 Complex C
  Other components
   EJC/TREX
    SPAPADRAFT_61389
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SPAPADRAFT_61389
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 18873870
NCBI-ProteinID: XP_007375588
JGI: 61389
UniProt: G3APZ1
LinkDB
Position
Unknown
AA seq 220 aa
MSDILEKSLDEIIGEKKKDPRRGPRPGPPRRFRGGHASFSRGGGAQHGKIHKQRPAGHHG
HPKRLNYSSLPRDIASLAGSRPVLRVKNIHPDLNGEDLSQLFGNISPVDFVKFDAENDSN
AYVCFHNDNAKNNAEAIEKYDGKKAMGKILIVENAVSLADRISSLPVRRQPVTPAALKHH
KKPVGKGRRRSKPSVEDLDKELNAYMNADADQPSDAMNVD
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtcagacatattagaaaagtcattagacgagataatcggagagaagaagaaagatcca
cgtcgtggaccccgccctggtccacctcgtcgattcagaggaggtcatgcttcattttcc
agaggcggtggtgcacaacatggcaagattcacaaacaaagaccagcaggacaccatgga
catcctaagagactcaactactcttcattgcctagagacattgcctcgcttgctggatcc
agaccagtattgcgtgtgaagaacatccaccccgatttgaatggggaagacttgtctcag
ttgtttggcaatatatctccagttgactttgtcaagtttgatgccgaaaatgattccaac
gcttatgtttgtttccacaatgataacgccaagaataatgcagaagcaattgaaaagtac
gatggtaagaaagccatgggaaagatattaattgtggaaaatgcagtttcattggctgat
cgtatatcgagccttccagtaagacgacaaccagtaactcctgctgctttgaaacatcat
aaaaagccagttggcaaaggtagaagaaggagtaaaccttccgtggaagatttagacaag
gaattgaacgcttacatgaatgctgatgcagatcaaccaagtgatgctatgaatgtcgat
taa

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