KEGG   Spathaspora passalidarum: SPAPADRAFT_61683
Entry
SPAPADRAFT_61683  CDS       T03101                                 
Name
(RefSeq) DNA-directed RNA polymerases I
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03020  RNA polymerase
spaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPAPADRAFT_61683
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPAPADRAFT_61683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spaa03021]
    SPAPADRAFT_61683
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_61683
Transcription machinery [BR:spaa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     SPAPADRAFT_61683
  RNA polymerase III system
   RNA polymerase III
     SPAPADRAFT_61683
  RNA polymerase I system
   RNA polymerase I
     SPAPADRAFT_61683
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SPAPADRAFT_61683
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 HypA Zn_Ribbon_YjdM HVO_2753_ZBP Zn_ribbon_DZR_6 TackOD1 Zn_ribbon_5 NCD3G FYVE FYDLN_acid DUF7129 FYVE_2 Prok-RING_1 DUF7459 zf-C3HC C1_1 DUF1451 DUF7576 Zn_ribbon_8 IBR_1 Zf_2nd_IFT121 zf-C2H2_DHX34
Other DBs
NCBI-GeneID: 18874004
NCBI-ProteinID: XP_007375896
JGI: 61683
UniProt: G3ANZ5
LinkDB
Position
Unknown
AA seq 73 aa
MASPQREGFSIPSSISHAALGQVTSKSLGVKYNCAQCAASFSLSKNDAIRCKECGHRVIY
KSRTRRMVQFEAR
NT seq 222 nt   +upstreamnt  +downstreamnt
atggcctccccacaaagagaagggttcagtatcccatcatcaatctcccatgctgcttta
ggtcaagttaccagcaagtccttaggtgttaagtacaactgtgcccaatgtgctgcctcc
ttttccttgagcaaaaacgacgccatcagatgtaaggaatgtggtcatagagttatttac
aagtctagaaccagaagaatggtgcaatttgaagctcgttaa

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