Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
|
Organism |
spaa Spathaspora passalidarum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:spaa00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_62216
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_62216
03015 mRNA surveillance pathway
SPAPADRAFT_62216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:spaa03019]
SPAPADRAFT_62216
03041 Spliceosome [BR:spaa03041]
SPAPADRAFT_62216
Messenger RNA biogenesis [BR:spaa03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPAPADRAFT_62216
TREX complex
SPAPADRAFT_62216
Spliceosome [BR:spaa03041]
Complex C
Other components
EJC/TREX
SPAPADRAFT_62216
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPAPADRAFT_62216
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
220 aa
MSASLDKSLDEIISSTKKPFKGRRAGSKIGGGAKRVGKKVGGTTQKKPIVSFKKGGNAAQ
AAAAAKAFDLSYATKVNVSGLPRDLKQENIKDFFQSQVGGVHTVALSYNEKGQFKGHATV
IFKTNKSATLAIEKYNGAPIDNGSSKLRLELIVDPSKRPLATRIAPNKVGAAPKVAAAKQ
VLNKKKTDAKKQQPNKKKPAKKTKKTIEELDQEMADYFDN |
NT seq |
663 nt +upstreamnt +downstreamnt
atgtccgcctcattagataaatctttagatgaaatcatttcttctaccaagaagccattc
aagggaagaagagccggttctaagatcggtggtggtgccaagcgtgtgggtaagaaagtt
ggtggaactactcaaaagaaacctattgtttctttcaagaaaggtggcaatgccgctcaa
gcagcagctgctgctaaagcttttgatttgagctatgctaccaaggttaatgtatctggt
ttaccaagggatttaaaacaagaaaatatcaaggattttttccaatcacaagttggtggt
gttcacactgttgctttaagttacaatgaaaagggtcaattcaagggtcacgccactgtt
attttcaagactaacaaatctgctactttagctattgaaaaatacaatggtgccccaatt
gacaacggatcatctaaattaagattagaattaattgtcgatccaagtaaaagaccatta
gctactagaattgcaccaaataaggttggtgccgcaccaaaagttgctgctgccaagcaa
gtcttgaataagaagaagaccgatgccaagaagcaacaaccaaacaagaagaagccagct
aagaagactaagaagactatcgaagaattagaccaagaaatggctgattatttcgataac
taa |