KEGG   Spathaspora passalidarum: SPAPADRAFT_62216
Entry
SPAPADRAFT_62216  CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03013  Nucleocytoplasmic transport
spaa03015  mRNA surveillance pathway
spaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAPADRAFT_62216
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPAPADRAFT_62216
   03015 mRNA surveillance pathway
    SPAPADRAFT_62216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spaa03019]
    SPAPADRAFT_62216
   03041 Spliceosome [BR:spaa03041]
    SPAPADRAFT_62216
Messenger RNA biogenesis [BR:spaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SPAPADRAFT_62216
    TREX complex
     SPAPADRAFT_62216
Spliceosome [BR:spaa03041]
 Complex C
  Other components
   EJC/TREX
    SPAPADRAFT_62216
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SPAPADRAFT_62216
SSDB
Motif
Pfam: RRM_1 RRM_3 FoP_duplication DUF4397 RRM_PARP14_3 CAP18_C
Other DBs
NCBI-GeneID: 18874220
NCBI-ProteinID: XP_007376385
JGI: 62216
UniProt: G3AQR0
LinkDB
Position
Unknown
AA seq 220 aa
MSASLDKSLDEIISSTKKPFKGRRAGSKIGGGAKRVGKKVGGTTQKKPIVSFKKGGNAAQ
AAAAAKAFDLSYATKVNVSGLPRDLKQENIKDFFQSQVGGVHTVALSYNEKGQFKGHATV
IFKTNKSATLAIEKYNGAPIDNGSSKLRLELIVDPSKRPLATRIAPNKVGAAPKVAAAKQ
VLNKKKTDAKKQQPNKKKPAKKTKKTIEELDQEMADYFDN
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtccgcctcattagataaatctttagatgaaatcatttcttctaccaagaagccattc
aagggaagaagagccggttctaagatcggtggtggtgccaagcgtgtgggtaagaaagtt
ggtggaactactcaaaagaaacctattgtttctttcaagaaaggtggcaatgccgctcaa
gcagcagctgctgctaaagcttttgatttgagctatgctaccaaggttaatgtatctggt
ttaccaagggatttaaaacaagaaaatatcaaggattttttccaatcacaagttggtggt
gttcacactgttgctttaagttacaatgaaaagggtcaattcaagggtcacgccactgtt
attttcaagactaacaaatctgctactttagctattgaaaaatacaatggtgccccaatt
gacaacggatcatctaaattaagattagaattaattgtcgatccaagtaaaagaccatta
gctactagaattgcaccaaataaggttggtgccgcaccaaaagttgctgctgccaagcaa
gtcttgaataagaagaagaccgatgccaagaagcaacaaccaaacaagaagaagccagct
aagaagactaagaagactatcgaagaattagaccaagaaatggctgattatttcgataac
taa

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