Spathaspora passalidarum: SPAPADRAFT_62679
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Entry
SPAPADRAFT_62679 CDS
T03101
Name
(RefSeq) Pre-rRNA-processing protein IPI3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_62679
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
SPAPADRAFT_62679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_EML_2
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_VPS8
NBCH_WD40
Beta-prop_WDR11_2nd
WD40_RFWD3
WD40_Gbeta
WD_LRWD1
Beta-prop_Aladin
Beta-prop_IFT122_2nd
Beta-prop_SPT8
WDR54
Motif
Other DBs
NCBI-GeneID:
18874430
NCBI-ProteinID:
XP_007376847
JGI:
62679
UniProt:
G3AT51
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MDESIFYIPTPSKNSASHATSIHTSHHHITFRASSSPRNGAYLTGFGPGERLFTCSATKA
LIEVYSWGKEGVDQRIPLPEALTCLTVVPQPVSASDELEKLTKFRLPWLLAGGTASGKIY
IWELTSGDLVSVRDAHYQGITTVKFSPCGTFLVTGGDDARVIVWSVVDLLTDDKAKPYFS
ITDHTLPITDLLLSDSGVVHDLRLYTTSTDCTVRVYDVLSKSLLTTFVLPYGVNCVAKDP
ANRALYVGLVNGMIRTIPLYTINKTTSVLESIGGMNKIITIDNDVNLANTFTHHHAPITQ
LDISLDGTSLISGDETGVVYASDIVTKQIIKTFTKCDSAIAYLKVETLPKSIDSGITTVD
KKHRMIPPFKRVLRSDEEHNLFVDIPGHHLSDNSSFEQWLDQKQQEEVEFKNLSDVASEV
KQVEEKTYNKDLELKLQRLSAVYSELRTKHEQLIKDHANLLDRVDNQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcaatattctatatacctaccccatcaaagaatagcgcatcgcatgcgact
tcaatccatacttcgcatcatcatataacattccgtgcatctctgtccccgagaaatggt
gcctaccttactggatttggtccaggtgaacgattattcacttgttctgcaaccaaagcc
ttgattgaagtgtacagttgggggaaagaaggggtcgaccaaagaattcctttgccagaa
gcattaacctgtcttactgttgttccacaaccagtctcagcatcagatgagttggaaaag
ttgaccaagttccgtctcccgtggttgttagctggtggtactgcaagtggaaaaatatat
atctgggaattaaccagtggtgaccttgtaagtgttcgtgatgcccattatcaaggtata
accacggtcaagtttagtccatgtggtaccttcttagtcactggaggtgacgatgctaga
gttattgtctggagtgtagttgatttgttaactgacgacaaggctaaaccatacttttcc
attactgaccacacgttaccaattacagacttattattgagtgatagtggagttgttcat
gatttgcgattatatactacaagtactgactgtactgttagagtttacgatgtacttagc
aagagtttattgactacatttgtcttgccatatggtgttaattgtgttgctaaagatcct
gcaaaccgtgccctttacgttggtcttgtcaatggaatgattagaacgatcccactatat
accattaacaaaactacttcagtgcttgaaagtattggtggtatgaacaaaattataact
attgataatgatgtaaatcttgccaatacattcacccatcaccatgcaccaattactcaa
ttggacatatccttggatggaacctccctcatttcaggggatgaaacaggagtagtatat
gcgctggacattgttaccaagcaaatcatcaagacattcactaaatgtgattcagccatt
gcatatttgaaagtagagaccttgcctaaaagtatcgacctggggatcactacagtcgat
aagaaacatcggatgatcccacctttcaaacgggtcttgcgtagtgatgaggagcacaat
ttgttcgttgacatcccggggcatcatctctctgacaacctgtcatttgaacaatggctc
gatcaaaagcaacaagaagaagtagaatttaaaaatttgtctgacgttgcatccgaagtt
aaacaggttgaagagaagacctacaataaagacttggaattgaagttacaacgattatcg
gctgtttattcagagttgcgaactaaacatgaacaattgatcaaggaccatgcaaattta
cttgatcgagttgacaaccagtaa
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