KEGG   Spathaspora passalidarum: SPAPADRAFT_62679
Entry
SPAPADRAFT_62679  CDS       T03101                                 
Name
(RefSeq) Pre-rRNA-processing protein IPI3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
spaa  Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spaa03009]
    SPAPADRAFT_62679
Ribosome biogenesis [BR:spaa03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    SPAPADRAFT_62679
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_HPS5 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Beta-prop_VPS8 NBCH_WD40 Beta-prop_WDR11_2nd WD40_RFWD3 WD40_Gbeta WD_LRWD1 Beta-prop_Aladin Beta-prop_IFT122_2nd Beta-prop_SPT8 WDR54
Other DBs
NCBI-GeneID: 18874430
NCBI-ProteinID: XP_007376847
JGI: 62679
UniProt: G3AT51
LinkDB
Position
Unknown
AA seq 467 aa
MDESIFYIPTPSKNSASHATSIHTSHHHITFRASSSPRNGAYLTGFGPGERLFTCSATKA
LIEVYSWGKEGVDQRIPLPEALTCLTVVPQPVSASDELEKLTKFRLPWLLAGGTASGKIY
IWELTSGDLVSVRDAHYQGITTVKFSPCGTFLVTGGDDARVIVWSVVDLLTDDKAKPYFS
ITDHTLPITDLLLSDSGVVHDLRLYTTSTDCTVRVYDVLSKSLLTTFVLPYGVNCVAKDP
ANRALYVGLVNGMIRTIPLYTINKTTSVLESIGGMNKIITIDNDVNLANTFTHHHAPITQ
LDISLDGTSLISGDETGVVYASDIVTKQIIKTFTKCDSAIAYLKVETLPKSIDSGITTVD
KKHRMIPPFKRVLRSDEEHNLFVDIPGHHLSDNSSFEQWLDQKQQEEVEFKNLSDVASEV
KQVEEKTYNKDLELKLQRLSAVYSELRTKHEQLIKDHANLLDRVDNQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacgagtcaatattctatatacctaccccatcaaagaatagcgcatcgcatgcgact
tcaatccatacttcgcatcatcatataacattccgtgcatctctgtccccgagaaatggt
gcctaccttactggatttggtccaggtgaacgattattcacttgttctgcaaccaaagcc
ttgattgaagtgtacagttgggggaaagaaggggtcgaccaaagaattcctttgccagaa
gcattaacctgtcttactgttgttccacaaccagtctcagcatcagatgagttggaaaag
ttgaccaagttccgtctcccgtggttgttagctggtggtactgcaagtggaaaaatatat
atctgggaattaaccagtggtgaccttgtaagtgttcgtgatgcccattatcaaggtata
accacggtcaagtttagtccatgtggtaccttcttagtcactggaggtgacgatgctaga
gttattgtctggagtgtagttgatttgttaactgacgacaaggctaaaccatacttttcc
attactgaccacacgttaccaattacagacttattattgagtgatagtggagttgttcat
gatttgcgattatatactacaagtactgactgtactgttagagtttacgatgtacttagc
aagagtttattgactacatttgtcttgccatatggtgttaattgtgttgctaaagatcct
gcaaaccgtgccctttacgttggtcttgtcaatggaatgattagaacgatcccactatat
accattaacaaaactacttcagtgcttgaaagtattggtggtatgaacaaaattataact
attgataatgatgtaaatcttgccaatacattcacccatcaccatgcaccaattactcaa
ttggacatatccttggatggaacctccctcatttcaggggatgaaacaggagtagtatat
gcgctggacattgttaccaagcaaatcatcaagacattcactaaatgtgattcagccatt
gcatatttgaaagtagagaccttgcctaaaagtatcgacctggggatcactacagtcgat
aagaaacatcggatgatcccacctttcaaacgggtcttgcgtagtgatgaggagcacaat
ttgttcgttgacatcccggggcatcatctctctgacaacctgtcatttgaacaatggctc
gatcaaaagcaacaagaagaagtagaatttaaaaatttgtctgacgttgcatccgaagtt
aaacaggttgaagagaagacctacaataaagacttggaattgaagttacaacgattatcg
gctgtttattcagagttgcgaactaaacatgaacaattgatcaaggaccatgcaaattta
cttgatcgagttgacaaccagtaa

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