Spathaspora passalidarum: SPAPADRAFT_63027
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Entry
SPAPADRAFT_63027 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_63027
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
SPAPADRAFT_63027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
18874559
NCBI-ProteinID:
XP_007377133
JGI:
63027
UniProt:
G3ASI2
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MKKNDDVEVEGQSLLLVEEEEINDEIKPLYAGHVVAVVDRIPGQLFAGTLGLLRPAQAAQ
AARDKKNGKESSVHTPKSPKIVWFKPTDKKVPLIAIPTEQAPKDFVENHEQYADQLFVAS
IKRWPITSLHPFGTLVSKLGKIEDPSTEIDSILRDNNFLCDEYPEEDEEEITVNMYDLPL
PDPEFENRARTEYLNDYIIAFSQNGSFVDHALHVKRLSSTKIELGFHAADVSYFIKPGSI
LERKSKKRSSSVFLPQKMVSLYPRHVQQMISFTENERNLAVSVIFEIDTLNFEVEDLYIH
ESVIVPKQVVNYDSFDKVLVGGEQGEISSATCDYIKTFSLIAKEFRRQRLDNRELGISPN
LTLLDQLDDVRVRLSLNIFNDSLAFDVISEISHKVNTAIAAKIHAGLGDHALLRRQALPT
LQKMETFVRKATNLGYKMDTSTSASLQNSILKIEDATKRQCVETLLYKCMSRGRYYVAGK
QDPDSYGHYYLNLPLYAHFTAPLRRYADLIVHRQLKAVLNKVEYDIDLDNLKAVADYCNF
KEDCASQAQEQAIHLLVSQTINEVSESAGQLLCMGTVIQVYESSFDVFIPEFGVEKRVHG
DQLPLVKAEFDKLDRVLELYWEKGVDSATYIPPDEQTSLSYRNSIKNKHRASAIHAAKIQ
SKTILEKNNVITDSIAEKLAELKLEPPKLSIPTLKNGENVTTATKSMPSTPVLSGNGGSD
EFPKSLRTNSSSVITGDSGLAPYLQDTITRVEGDSCIQVIKELTQVPVLIRAEIGMALPC
LTVRVLNPFC
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaatgatgatgttgaagttgaaggacaatctttacttcttgttgaagaagaa
gagattaatgatgagattaaaccattgtatgctggacatgttgttgccgttgttgataga
atccccggacaattatttgctggtactcttggtttattgcgtcctgctcaagccgcacaa
gctgctcgtgataagaagaatggtaaagaatcatcggtacatacccctaaatcacctaaa
attgtttggtttaaaccaaccgataaaaaagtgccacttattgccattcctactgaacaa
gcacctaaagatttcgtggagaaccatgaacaatacgcagaccagttatttgtggcatcc
atcaagagatggccaatcacaagtttgcaccctttcggtacattggttagcaaattggga
aagattgaagatccatccactgaaattgattcgattttaagagataacaatttcttgtgt
gatgaatatcctgaagaagatgaagaagaaatcacggtcaatatgtatgatttaccactt
cctgatcctgagtttgagaaccgggcaagaactgagtatttgaatgattatatcattgca
ttctcccagaatggtagctttgtcgaccatgccttacacgttaaacgtttatcttcaacc
aagattgaattgggattccatgcagctgatgtttcttattttatcaaaccgggatctatc
ttggaacgcaagtccaaaaagaggtcaagttcggtatttttacctcagaagatggttagc
ttataccctcgccatgtccaacaaatgatttcattcacggaaaatgaacggaatttggct
gtatcagtgattttcgaaatcgatacattaaactttgaagttgaagatttgtatattcat
gaatcagtgattgttcctaaacaagttgttaattacgattcctttgacaaagtattggtt
ggcggtgaacaaggtgagatatcgagtgccacatgtgattatatcaaaacattcagtttg
attgctaaggaatttagaagacaaagattggataatcgtgaattgggaatctcgccaaac
ttgacattattggatcaattggatgatgtaagagtaagattgagtttgaacattttcaac
gattccttggcatttgatgttatttctgaaatttcccacaaggttaatactgcaattgcg
gccaagatccatgctgggttgggtgatcatgcattattgagacgccaggcattacctaca
ttgcaaaagatggaaacatttgtgagaaaggctactaatttaggatacaagatggacact
ctgactctggcctcgcttcaaaattccattctcaagattgaagatgccactaaacgtcaa
tgtgtggaaactttgctttacaagtgcatgtctcgtggtagatattatgttgctggtaaa
caagatccagattcatatggtcattattatttgaatttgccattgtatgctcactttacg
gctcctttacgtcgatatgccgatttgattgttcatagacagttgaaggcggtgttgaat
aaagttgagtatgacattgatttggacaatttgaaagccgtggctgattattgtaatttc
aaagaagattgcgccctgcaagcacaagaacaagctatacatttgttggtttcccaaact
ataaatgaagttagtgaaagtgctggacaattgctttgcatgggtacggttatccaggtt
tatgaatcatcatttgatgtgtttattcctgaatttggggtggagaaacgagtccatggt
gatcaattgcccttggttaaggctgaatttgataaattggatagagttttggaattgtat
tgggaaaagggtgttgattctgcaacttatattccaccagatgaacaaacttcattgagt
taccgtaattccatcaaaaacaaacatagagcttcggctatacatgccgctaagatccaa
agcaagacgatcttggagaagaataatgtgattactgattccattgccgagaagttggca
gaattgaagttggaaccaccaaaattgagtattcctactttgaagaatggcgagaatgta
actacagccactaaatccatgccaagtactccggtgttgagtggcaatggtggttctgat
gaattccccaagagtttacgtaccaattccagttcagtaattactggcgatagtggactt
gctccatacttgcaagacacaattactcgagttgaaggtgattcatgtatacaagtaatt
aaggaattaacgcaagtgccggtgttgattcgggctgagatcggaatggcattgccttgt
ttgacagtacgggtattgaatccattttgctaa
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