KEGG   Spathaspora passalidarum: SPAPADRAFT_64988
Entry
SPAPADRAFT_64988  CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAPADRAFT_64988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spaa03041]
    SPAPADRAFT_64988
Spliceosome [BR:spaa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    SPAPADRAFT_64988
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SCAP Beta-prop_WDR75_2nd eIF2A Beta-prop_IFT122_1st WD_LRWD1 WDR54 DHFR_2
Other DBs
NCBI-GeneID: 18875008
NCBI-ProteinID: XP_007373343
JGI: 64988
UniProt: G3AIU8
LinkDB
Position
Unknown
AA seq 440 aa
MDMSFPQMELSEIPIINDTKSHTSFPDEFMIDEDEENLNIIEESEGSSIDEEEEEEDDVF
YTPGIQELYDTRTEILNQSLVKASQRVDSLRQKAKDSDFIKILKHRRSTNSKLATYELYG
SQLIPGNTRAISIVRFSKTSDLIACGSWDGSISILNSLDLSTRGQVVSGSHLEKVGGLDW
SFTSNENYLISGANEGTINLWNITDTQDKIKPKATIKDAHSARITKTLFHPIISKYAIST
SFDQTWKLWDLEMCKCLLEQEGHSKEVFCGSMHPDGSLFASGGLDGICHIWDLRSGRSIV
RLQKHMQGIYSTDWSPNGYHLATASGDCSVKIWDLRKLDRRDDEIFTIPSHKKIVSEVRF
FNKRNEILANESESISNGTFLVTSSYDGNVNIWSSDNWIKVRTLQGHTEKVMSCDINGDG
SQIISSGWDRSIKMWQSYQS
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggatatgagctttccccagatggagttaagcgaaattcccataatcaatgatacaaaa
tcacatacaagttttccagatgaattcatgattgatgaagatgaggaaaatttaaatata
atagaggaaagcgaagggagtctgatcgatgaagaggaagaagaagaggatgatgtgttt
tacactccaggtattcaagaactctatgataccagaactgaaatcttaaaccaatccctt
gtaaaagcttcccaaagagtagatagtttgaggcagaaagcaaaagattcagatttcatc
aaaattttaaagcatagacgttctactaactccaaattggccacttacgagttgtatggg
tcacaattgataccaggaaatacaagggcaatatctatagtaagattttccaaaaccagc
gacttaattgcttgtgggtcatgggatggttctattagtattttaaactctttagattta
tctaccaggggccaagttgtactgggactgcatctagagaaagtgggtggattagattgg
agttttacatctaatgaaaattatcttatttcaggagctaacgagggtacgataaacttg
tggaatataaccgatactcaagacaagataaaaccaaaagctaccatcaaagatgcccat
tctgctagaataacgaaaactttgtttcatccaattatatcaaaatatgctatatccaca
tccttcgaccaaacttggaaattatgggatcttgaaatgtgcaagtgtttactagaacaa
gagggtcattcaaaagaagtattctgtggaagtatgcatccagatggcagtttatttgca
tcaggaggtcttgacgggatatgtcatatttgggatttacgttctggccgtctgatagtc
aggctacaaaaacatatgcaaggaatatatagtacagattggtcaccaaatgggtatcat
ttggcgacagcaagtggggattgctcagtgaaaatatgggatcttcgtaaactagataga
cgagatgatgaaatattcacaataccatcccataaaaagattgttagtgaagtacgattc
tttaacaaacgaaacgaaatactagctaatgagtctgagtcaatttccaatggtacattc
ttggtaacttcttcatacgatggaaatgttaatatttggtcatcagacaactggattaaa
gtgagaactctccaaggacataccgaaaaagtcatgagttgtgatattaatggggacggt
tctcaaataataagtagtggatgggatcggtcaatcaagatgtggcagagctaccaactg
taa

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