Spathaspora passalidarum: SPAPADRAFT_64988
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Entry
SPAPADRAFT_64988 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_64988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_64988
Spliceosome [BR:
spaa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SPAPADRAFT_64988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR75_2nd
eIF2A
Beta-prop_IFT122_1st
WD_LRWD1
WDR54
DHFR_2
Motif
Other DBs
NCBI-GeneID:
18875008
NCBI-ProteinID:
XP_007373343
JGI:
64988
UniProt:
G3AIU8
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MDMSFPQMELSEIPIINDTKSHTSFPDEFMIDEDEENLNIIEESEGSSIDEEEEEEDDVF
YTPGIQELYDTRTEILNQSLVKASQRVDSLRQKAKDSDFIKILKHRRSTNSKLATYELYG
SQLIPGNTRAISIVRFSKTSDLIACGSWDGSISILNSLDLSTRGQVVSGSHLEKVGGLDW
SFTSNENYLISGANEGTINLWNITDTQDKIKPKATIKDAHSARITKTLFHPIISKYAIST
SFDQTWKLWDLEMCKCLLEQEGHSKEVFCGSMHPDGSLFASGGLDGICHIWDLRSGRSIV
RLQKHMQGIYSTDWSPNGYHLATASGDCSVKIWDLRKLDRRDDEIFTIPSHKKIVSEVRF
FNKRNEILANESESISNGTFLVTSSYDGNVNIWSSDNWIKVRTLQGHTEKVMSCDINGDG
SQIISSGWDRSIKMWQSYQS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggatatgagctttccccagatggagttaagcgaaattcccataatcaatgatacaaaa
tcacatacaagttttccagatgaattcatgattgatgaagatgaggaaaatttaaatata
atagaggaaagcgaagggagtctgatcgatgaagaggaagaagaagaggatgatgtgttt
tacactccaggtattcaagaactctatgataccagaactgaaatcttaaaccaatccctt
gtaaaagcttcccaaagagtagatagtttgaggcagaaagcaaaagattcagatttcatc
aaaattttaaagcatagacgttctactaactccaaattggccacttacgagttgtatggg
tcacaattgataccaggaaatacaagggcaatatctatagtaagattttccaaaaccagc
gacttaattgcttgtgggtcatgggatggttctattagtattttaaactctttagattta
tctaccaggggccaagttgtactgggactgcatctagagaaagtgggtggattagattgg
agttttacatctaatgaaaattatcttatttcaggagctaacgagggtacgataaacttg
tggaatataaccgatactcaagacaagataaaaccaaaagctaccatcaaagatgcccat
tctgctagaataacgaaaactttgtttcatccaattatatcaaaatatgctatatccaca
tccttcgaccaaacttggaaattatgggatcttgaaatgtgcaagtgtttactagaacaa
gagggtcattcaaaagaagtattctgtggaagtatgcatccagatggcagtttatttgca
tcaggaggtcttgacgggatatgtcatatttgggatttacgttctggccgtctgatagtc
aggctacaaaaacatatgcaaggaatatatagtacagattggtcaccaaatgggtatcat
ttggcgacagcaagtggggattgctcagtgaaaatatgggatcttcgtaaactagataga
cgagatgatgaaatattcacaataccatcccataaaaagattgttagtgaagtacgattc
tttaacaaacgaaacgaaatactagctaatgagtctgagtcaatttccaatggtacattc
ttggtaacttcttcatacgatggaaatgttaatatttggtcatcagacaactggattaaa
gtgagaactctccaaggacataccgaaaaagtcatgagttgtgatattaatggggacggt
tctcaaataataagtagtggatgggatcggtcaatcaagatgtggcagagctaccaactg
taa
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