KEGG   Spathaspora passalidarum: SPAPADRAFT_66091
Entry
SPAPADRAFT_66091  CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K14403  cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPAPADRAFT_66091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spaa03021]
    SPAPADRAFT_66091
   03019 Messenger RNA biogenesis [BR:spaa03019]
    SPAPADRAFT_66091
Transcription machinery [BR:spaa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     SPAPADRAFT_66091
Messenger RNA biogenesis [BR:spaa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SPAPADRAFT_66091
    U7-dependent histone pre-mRNA processing factors
     SPAPADRAFT_66091
SSDB
Motif
Pfam: CPSF73-100_C Beta-Casp Lactamase_B_6 Lactamase_B Anti-Pycsar_Apyc1 RMMBL Lactamase_B_2 Lactamase_B_3 Beta_lactamase3 Cortex-I_coil
Other DBs
NCBI-GeneID: 18875082
NCBI-ProteinID: XP_007374600
JGI: 66091
UniProt: G3AL42
LinkDB
Position
Unknown
AA seq 762 aa
MTVEEFSNEESFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGIHPALTGHSSFPFYDEYD
LSKVDILLISHFHLDHAASLPYVMQQTTFKGRVFMTQATKAIYRWLLQDFVRVTSIGTTK
MEGGEGQSSNLYTADDIMKSFDRIETIDYHSTMEIEGIKFTAYHAGHVLGACMYFIEIGG
LKVLFTGDYSREENRHLHAAEIPPVKPDILISESTFGTGTLESKADLEKKLTNHIHATLT
KGGRVLLPVFALGNTQELLLILDEYWNNNEDLQNINVYYASSLAKKCMAVYETYTSIMND
KIRLSASSSGHKSNPFDFKYIKSIRDLGKFQDMGPSVVIAAPGMLQAGISRQLLEKWAPD
PKNLVILTGYSVEGTMAKELLKEPHTIQSVNNPEMTIPRRIGIEEISFAAHVDFQQNSEF
IEKVSPSKIILVHGDSVPMGRLKSALLSKYSSRKGTEQEVKVFNPKNCEEVKIGFKGLKV
AKVLGSLAEEQLSMLKKEIETKIETENEKIVEIKEEMEVDANDGDKNEAGVDTLHTGQFL
SGVLVSKDFDLNLLQLQDLHEFTQLSTSFVKSKMNLRIHADISLMIYHLEQMFGYINILN
DDEEEWECVIMDVVDIFVDKTKTGPGLQISVEWINDNLMADSLADSVIAILYSIDSSPAS
VKLSSTTHTHVKQETESKSAHAKSEIADRIKRISTLLRAQFGDCLQDLDNDKATITIGKH
VAKIDYLNLTVECPSKVIKDRVESVIRRGCTLTAPLSQFQKV
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgacagtagaagaattctccaatgaagaaagcttcaagttctttggtctaggcgggtgt
aacgaagtaggccgttcttgccacattattgaatacaaaaataaagtaatcatgcttgat
gccgggattcaccctgccctcaccggacactcatccttcccgttctacgacgaatacgac
ttgtccaaagtcgatatcctcctcataagtcatttccatctagatcacgcagcatcgtta
ccatatgtgatgcaacagaccacattcaagggacgtgtgtttatgacccaggccactaag
gccatttatcggtggttacttcaggattttgtcagggttacctcgataggaacaactaaa
atggaaggtggcgaaggacagtctagtaatttgtataccgccgacgatatcatgaaatca
tttgatcgaatagaaacaattgattaccattccaccatggagatcgaggggataaagttc
actgcataccatgccgggcatgtccttggggcatgtatgtactttattgaaattggtgga
ttaaaagtattgttcacgggtgattactctagagaagagaatagacatttgcatgctgca
gaaatccctcctgtcaaaccagatattttgatctccgaaagtacttttggtaccggtacg
cttgaatctaaagctgacttggaaaagaaattaacaaaccatatccatgctacattgacc
aaaggggggagagtcctattacccgtctttgcccttggtaacacccaagaactcttgttg
attcttgatgaatattggaacaacaacgaagatcttcagaatataaacgtatactatgca
tccagtttagcaaaaaagtgtatggcagtgtacgaaacatacacgagtataatgaatgac
aaaatccggctttctgcctcctcgtcgggccacaagtccaacccgttcgacttcaaatac
ataaagtcgattcgagacttgggcaaattccaagacatgggcccatcagtggttattgcc
gccccagggatgttgcaagctggtatatcccgtcagctattggaaaagtgggcgcctgac
cccaagaatcttgttatattaactggttattccgtggaaggtaccatggccaaagagctc
ttgaaagagcctcacacgatccaatcagtaaacaatccggaaatgacgatcccgagacgt
attggtattgaagagatctcgtttgctgctcatgtcgatttccagcagaattcggagttt
attgaaaaagtgtcaccatccaagattatcttggttcatggagactctgttcctatgggt
agattaaagtcggccttgttgagtaagtactcttctagaaagggaactgaacaggaagtc
aaggtgttcaatcccaagaattgcgaagaagtcaagattggattcaaagggttgaaggtt
gctaaagtattggggtctttggccgaagaacaattgctgatgttgaagaaggaaattgaa
accaagatagaaacagaaaatgaaaagattgttgagattaaagaggagatggaagtggat
gcaaatgatggtgacaagaatgaagccggtgtagatacacttcacactggacaattctta
tctggtgtcctcgtttccaaagatttcgacttgaatcttcttcaattacaagatctccat
gaattcactcaattgtctacctcgttcgtcaaatccaaaatgaacttgcgaatccatgcc
gacatttcgttgatgatataccatttagaacaaatgtttggatacataaacatcctcaat
gacgacgaagaagaatgggaatgtgtgatcatggacgtcgttgacatatttgtggacaaa
accaagactggacctggtcttcaaatcagtgttgagtggatcaatgacaatttaatggca
gactccctagcagacagtgtcattgccattttatactctatcgactcatcgccggcctcg
gtcaagctctcgagcacaacccacacccatgttaaacaagaaacggagtccaagtctgca
catgcgaaatcagagattgccgatcgaatcaagagaatatccacgcttttacgggcccag
ttcggtgattgtttgcaggatttagacaatgacaaagcgacaatcacaatcggcaaacac
gtagccaagatagattacttgaatttgactgtggaatgtccttccaaagtcataaaggac
cgtgtggagagtgtcatacgaagaggatgtactttgactgctccattaagtcagtttcag
aaggtgtaa

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