Spathaspora passalidarum: SPAPADRAFT_68356
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Entry
SPAPADRAFT_68356 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_68356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_68356
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPAPADRAFT_68356
Spliceosome [BR:
spaa03041
]
Complex C
Other components
Step II factors
SPAPADRAFT_68356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
NB-ARC
ResIII
AAA_14
nSTAND3
ABC_tran
Flavi_DEAD
T2SSE
AAA_7
PhoH
AAA_11
HD_3
SRP54
Motif
Other DBs
NCBI-GeneID:
18875212
NCBI-ProteinID:
XP_007377194
JGI:
68356
UniProt:
G3ASU7
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MSSHTLNTNDKDLLDSISKLVTSHLKVNDDNFTITKFLLNLYKQTLNTSKPGRLIEFKRI
VKDNGGDGFPAEFINQTFNCIESLNPGKQESAHLPVLHLQNRIEDKNDRPTDDSRSVRHE
HERKPRYDIRRELHDLPLQVGQIYRGYVSEITPYGAFIRLRSPNSYQSGLCHISQISDTR
IHSVNDVLSLDQQVFVKITEIKEQQRRQRISLSMKGIDQDTGLEDPEANGKERGRSKEVK
KPIKRKLTSPERWELRQLISSGTVSIEDYPELAEEENTEFKHEPEIEVDIVLNPTQPKFL
KGQKLKYELPTLENVSQPAGSLKKIAEKGSELAKEFRQEKLKETKEATKDQDVFDPLFQE
VSESDESTNKRETFISQWKKSQKNVKYGKITSLPIQKQRQQLPIYSMRSELVEQIQNNQF
LVIVGETGSGKTTQIVQYIKEEEINKTLDGKTKIIGCTQPRRVAAQSVAKRVSEEIGCKL
GEEVGYTVRFDDNTSSSTVIKYMTDGMLQREALNDPSMSKYSVIMLDEAHERTIATDVLF
ALLKKAAAKNPDLKVIVTSATLDSGKFSAFFNNCPIVKIPGRTYPVEILYTKEPETDYLA
AALDSVMQIHLSEPAGDILVFLTGQEEIDTSCEVLFQRMKILGDSVPELIILPVYSALPS
EVQSKIFEPTPAGSRKVVLATNIAETSITIDGIYYVIDPGFVKINAYDPKLGMDSLTIHP
ISQAQANQRSGRAGRTGPGKCYRLYTEQAYNKEMIANTVPEIQRTNLSHTILMLKAMGIN
DLLTFEFMDPPSNNTMLVALQDLYTLDALDEEGYLTQLGKKMADFPMEPALAKTLIKSVE
FECTEEILTIVAMLSVQTIFYRPKEHQKLADQRKLRFHHPLGDHLTLLNVFQSWQLNGCS
KVWCQDNFIQERSMKRAMDVRKQLKSIMTKYGYRLTSCGSNIDLIRKTLCAGYFKNTSKR
IANEGYKTLAEETAVHLHPSSCLFGKNPEYVLFHSLLLTTREYMHCVTVIEPKWLYELAP
KFFRQGEGENKKQEKIVPLFKGNKDEWRLSTQKKRNLGR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcatacgctaaatacaaacgataaggacttgttagattcaatttccaaatta
gtaacttcccatttaaaagtaaatgatgacaatttcacaataacaaagttcttactcaat
ctttataaacaaacattgaatacatccaaaccaggtagattgatcgaatttaaacgaata
gttaaggataatggaggtgatggatttccagctgagttcattaatcaaacatttaactgt
attgagagtttaaatccaggaaaacaagaactggcacatctccctgtacttcatttacaa
aaccgtattgaagacaaaaatgatagacctacagatgacctgagatcagtacgacatgaa
catgagcgaaaacctagatatgatatacgacgagagcttcatgatttacctcttcaagtt
ggtcagatataccgtggctatgttagtgaaatcacaccctatggagcatttataagatta
agactgccaaatagttaccagtctggattatgccacatttcacaaatttcagatacaaga
atccacctggtcaatgatgtacttagtctcgaccaacaagtatttgtaaagattacagaa
ataaaggaacaacaacgtcgacagagaatatctttgagtatgaaaggtattgatcaagac
acgggattagaagatccagaggcgaatgggaaagagcgaggaagatccaaagaagtaaag
aagccaattaaacgaaagttaacctctcctgaacgttgggaactaagacagttaatatca
tctggtactgtctctatcgaagattatccagaattagctgaggaagaaaacaccgagttt
aagcatgaacctgaaattgaagttgacattgtattaaacccaacacaacctaaattctta
aaaggacagaaattgaaatatgaattgcccactttggaaaatgtatcccaaccagctggg
tcattaaagaaaattgctgaaaagggatcagaattagctaaggaatttaggcaagagaag
ttaaaagaaacaaaagaagctaccaaagatcaagatgtatttgatccattattccaagaa
gtatctgaatctgatgaatccaccaacaaaagagaaactttcatatcacaatggaaaaag
tcccagaagaatgtcaaatacggtaaaattacaagtcttcctattcaaaaacagagacaa
caacttccaatatactccatgagatctgaattagttgagcagatccaaaataatcagttt
cttgtcatagtaggggaaactgggtcaggtaaaactacacaaattgtacaatacataaaa
gaagaagaaattaacaagacattagatgggaaaaccaagatcatcggatgtacccaacca
agaagagttgctgcccaatcagtggccaagagagtttcggaagaaattggctgtaaatta
ggtgaagaagttgggtatactgttagatttgatgataatactagttcatctactgtgatt
aaatacatgactgatgggatgttgcaacgagaggcattgaatgacccatctatgagtaaa
tactcggtaattatgttagatgaagctcatgaaaggaccatcgcaacagatgtcttgttt
gcattgttaaagaaagcggcggccaagaatccagatttgaaagtgattgtaacttcagct
acattggattctggaaagttttctgcttttttcaacaattgtccaattgtgaagattcca
ggaagaacttacccggtggagatattatatactaaggaacccgaaactgactacttggca
gctgctttagattcagttatgcaaatacatttatctgaaccagcgggtgatatacttgtc
ttccttacaggccaggaagaaatcgatactagttgtgaagttcttttccaacgaatgaag
atcctcggtgattcggtaccggaattgattattcttccagtatactccgcgttgccttca
gaagttcaatcgaaaatctttgaaccaacaccagcaggatcaagaaaagttgtgttggca
actaacattgctgaaacttccattaccattgatggaatctactatgttattgaccctggg
tttgttaaaatcaacgcatatgatcccaaattaggtatggactcgttaacaatacatccc
atttctcaggcccaagcaaatcaaagaagcggtagagccggtagaaccggcccaggaaaa
tgttacaggttatatacggaacaagcatacaacaaggagatgattgccaataccgttcct
gaaatccagaggacaaatttgtctcatactatcttaatgttgaaagctatgggaatcaat
gatttgcttacgtttgaatttatggatccaccttccaataacaccatgttggtggcatta
caagatttgtacaccctcgatgcattggatgaggaggggtacttgacgcaattgggaaag
aaaatggcggattttccgatggagccggcattggctaaaactttgatcaaatcagtcgag
tttgagtgtaccgaagagattctcactattgtggctatgttgtctgtacagactatattt
taccgacctaaagaacatcaaaaattagctgatcaaagaaaacttcgattccatcaccca
ttaggtgaccatctcaccttactaaatgtgttccaatcatggcagttaaatgggtgtagt
aaagtgtggtgtcaagacaacttcatccaagaaagaagtatgaagcgagccatggatgtt
agaaagcagttgaaaagtataatgacaaagtatggctataggcttacatcttgcggttcc
aatatagatcttattagaaagacattgtgtgctgggtatttcaaaaataccagtaagaga
attgcgaatgagggttacaagacattagctgaggaaactgccgtgcacttgcatccatcg
tcttgtctatttgggaaaaatcccgagtatgtgctatttcattcgttgcttttaactacg
agggaatacatgcattgtgttacggtaattgaacctaaatggctatacgaattagcacca
aaattcttcagacaaggtgaaggagagaataagaaacaagaaaagattgttccattattc
aaaggtaataaagatgaatggagattaagcacgcaaaagaaaagaaatttaggtagataa
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integrated database retrieval system
