Spathaspora passalidarum: SPAPADRAFT_70543
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Entry
SPAPADRAFT_70543 CDS
T03101
Name
(RefSeq) histone deacetylase HDA1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spaa01009
]
SPAPADRAFT_70543
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_70543
04131 Membrane trafficking [BR:
spaa04131
]
SPAPADRAFT_70543
03036 Chromosome and associated proteins [BR:
spaa03036
]
SPAPADRAFT_70543
Enzymes [BR:
spaa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
SPAPADRAFT_70543
Protein phosphatases and associated proteins [BR:
spaa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SPAPADRAFT_70543
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SPAPADRAFT_70543
Membrane trafficking [BR:
spaa04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SPAPADRAFT_70543
Chromosome and associated proteins [BR:
spaa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
SPAPADRAFT_70543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Motif
Other DBs
NCBI-GeneID:
18875332
NCBI-ProteinID:
XP_007374013
JGI:
70543
UniProt:
G3AIF9
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MSEPDSLKDDVVPQANEKKVDGDLNVGSGETTSAAEVSTESQQEQDKVAGKASDKQLIEP
EEKSKEKEKEKQTTESLHDGAIPENEDVEEKQVDDIVEVVKQEDEETNLEKQDKIKQEEP
EPMEIDEVEAKDENLESVSSEIAKDETTSGEPKKHEVSNGEEVEPPHKKIKLEEQSNGIN
ENKIVVVPPTKPHLFYTPLKTGLVYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKKL
AEAGLIQDSSLSGVNDIGPLMLKIPIREATAEEILEVHSESHLKFIESTETMTRDQLMEE
TEKGDSIYVNNDSYFSARLSCGGTIEACKAVIEGRVKNSLAVVRPPGHHAEPDSPGGFCL
FSNVAVAAKNLLKTYPESVRKIVIIDWDIHHGNGTQKSFYNDPRVLYISMHRYENGRFYP
GTKYGNSDQVGEEEGEGFNINIPWRSSGMHDGDYVYAFNKVILPTIIEFDPDLIIVSSGF
DAADGDIIGGCHVTPAGYGYMTHMLKGIAKGKLAVILEGGYNLDSISKSALAVAKVLVGE
PPENTISMQPHLDAVEVVDEVIKIQAKYWKCLRHGIPSTSFDDVFDLPDDTNYKLVNISD
TIRSHQNNELFNKYSFINIPIIGTSGSPSDDKGAFTVDLPAQLEDIIIASPDIHNCTTII
LSIHDPPDIWANIHPVSGTIEAGSSVILEHPLTKIIDRVAKEESASSERIGYIDINIPSF
PLPIPSFTKSPSSSYNPTIFAQELLLYIWDNYLAYFSVKKLVFVGFGDAYQAIVHLFGKR
PSSDIKELVKGTIAFVNRTTLKPLVPVMDESMVDWYYQNSVVFTSCLNPCWSGVNGNGKD
MDETKRPRRKFGRVLKASGDGLYDVIQERFDEGVDFILDSIEDYSSEESNN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccagattcgttgaaggatgacgttgtaccacaagccaatgagaaaaaggtg
gatggtgatttaaacgttggaagcggagagacaacgctggctgctgaagtctctacagaa
agccagcaagaacaagacaaagttgccggaaaagcatcagacaagcaattaatcgaacca
gaagagaaatccaaagagaaagagaaggagaagcaaaccacagaatctttgcacgatggc
gctattccagaaaatgaggatgttgaagaaaagcaagttgacgacattgtagaggtagtc
aaacaagaagacgaagaaacaaacttagaaaagcaagataaaatcaaacaagaagaacct
gaaccaatggaaatagatgaagttgaagcaaaggacgaaaatttagaactggtaagttca
gaaattgccaaagacgaaacaacctccggagaacccaagaagcatgaagtttctaatggt
gaagaagtcgaacctccacataagaaaataaaactagaagaacaatccaatggaatcaat
gaaaacaagattgtcgttgttccacccacaaagccacacttattctatacacctttgaaa
acaggtttagtctacgacgttcgtatgagatatcatgccaagatctttacttcatacttt
gaatacatcgacccacatccagaagatcctcgacgtatctacagaatctacaagaaactt
gctgaagcaggacttattcaagattcgtctctttcaggcgtaaatgacattggacccctt
atgctcaagatccccatcagagaagctacagctgaggaaatcttggaagtacattctgaa
tctcatctcaagtttattgaatctactgaaactatgactcgcgatcaattgatggaagaa
accgaaaaaggtgactcgatatatgtgaataatgattcttacttctccgcaagattgtcg
tgtggaggaacaattgaagcctgtaaagcagttattgaaggaagagttaagaactctttg
gcagtagttagacctccaggtcatcatgctgagcccgacagccctggtggattttgtttg
tttagtaatgttgcagttgctgctaaaaacttgttgaaaacgtacccggaatccgtcaga
aagattgtgattattgattgggatatccatcatggtaacggtactcagaaatccttctac
aacgatcctcgagttctttatatctcaatgcatcgttatgaaaatggccgtttttaccct
ggaaccaaatatggaaacagtgaccaagtcggtgaagaagaaggtgaagggttcaatata
aatatcccatggcgtagttctggtatgcatgatggtgattatgtctatgctttcaacaag
gttattctccccacaatcatcgaattcgatcctgatttaatcattgtcagctcggggttt
gatgccgctgatggggatatcattggtggttgtcatgtgacccctgctggttatggatac
atgactcacatgttgaaaggaattgccaaggggaagttggcggttattttggaaggtggg
tataatttagattccatcagtaagagtgctttggccgtggctaaagtgttagtgggtgaa
cctcctgagaacactatctctatgcaaccgcatttggacgccgttgaagttgtggatgaa
gttatcaaaattcaagccaaatattggaagtgcttgagacacggtattccaagcacgagt
tttgacgatgtttttgatttaccagacgataccaattacaagttggttaatatttctgat
acaatcagatcacatcaaaataatgaattattcaacaaatattcgtttattaatattccc
atcattggcacactgggctctccatctgatgacaagggggcgttcacggttgatttaccg
gcccaacttgaagacataatcattgctagtcccgatattcataactgtaccacaatcata
ctcctgattcacgatcctcctgatatttgggctaacattcacccagtaagtgggacaatt
gaggctggatcatctgtgattctcgaacatccactcacgaaaataatcgaccgcgtagct
aaagaagaatcagcgtcgtcagagagaattggttatatcgacatcaatatcccatcattc
ccgctccctattcctagtttcaccaagtcgccaagttccagctacaatcctactatattc
gcgcaagagttgttgttatacatttgggacaattaccttgcatatttctcagtcaagaag
cttgtgtttgtagggtttggggatgcataccaggcgatagtacatctctttggtaagcga
ccactgagtgatattaaagagttggtcaagggaacaattgcttttgttaataggacgacc
ttgaagccattagtccccgtgatggacgagagcatggtggattggtactatcagaactca
gtcgtgttcactagttgtttgaacccatgttggagtggtgtcaatgggaacggtaaggat
atggacgagaccaagagaccaagaaggaaattcgggcgagttttgaaagctagtggcgat
gggttgtatgatgttattcaagagcgattcgatgaaggggtggattttattttggattcg
attgaagattattcatcggaggagagtaacaattag
DBGET
integrated database retrieval system
