Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K14327 | regulator of nonsense transcripts 2 |
|
Organism |
spaa Spathaspora passalidarum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:spaa00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAPADRAFT_71334
03015 mRNA surveillance pathway
SPAPADRAFT_71334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:spaa03019]
SPAPADRAFT_71334
Messenger RNA biogenesis [BR:spaa03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
SPAPADRAFT_71334
mRNA cycle factors
P-body specific factors
SPAPADRAFT_71334
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1031 aa
MSSELDNRRKELLDLNTKAWNGEHVYKVAAKLDSSLKKNTAFIKKIKTGVNSDQYKSVLK
DIETVSIEKYLSEVIVNLVEALYKVSKSDDILAAIEIVSAFHQRFTTLFTPQLLIHVLVG
ISNPVRSHQSDIDEKEEQSRIVRQRNLLRLVGEFYIIGVFRVLKDCNKDSIPHELLLKFG
KQASEPILIVVIKDLMNFELKSGNSLSVIQSFLKRFQNIICNDDNVLLSFEVRNVLVQIF
SIYSKAVFDITVDLKKRVKQLTERNNKASIRTGRILEEIQVELDDVKSRYEKFKSTAEFL
SDTLDIPPLNWNLDEEDTKQEPDSVVELVKSKSLNEDDLNGVWEDIKEKTFYTVIPSLGE
IMDSTSMENSKSVSSKDGERIQDFLNRLEDVGANDLEQLVVEFNNLNLNNKATKNRIMRF
FIETSNVSNLKYYARFLKINEINLSDLIEELITYLDKGFRHQLYQNKLNFKNILFFVELI
KFKMVPIHLIFHKIRTLTLNISATNNIDILAVFYENVGRFLMNEPEYKDLMVEMIELLKE
KSKKSNLKINDKLAINNLLLIVNPPANTKVQREKSTLSLKQQFIQRLIRVELDAKSVPVI
IRLLNKLHIQTDEESCDTVLDCFAHPELVNYDNLPALAEVLQMYSKNHKKIVVYTIDTLI
ENIIRGLELNDYRMNRVRMSQIKLVAELYNKKIVQFKLLNDLLYRILCSGHPNNQPLPNN
WEVEIDLPDNYFRIQLCCLLLLSIKSIIVDSDISPKKKSPAKQASDLKKKNEINKELLGV
FTTFLQYYIFCKQTPLPVELQFKLTDLFAKYEDVSTVKRYETIREVVQKLQESIQTKKEV
ESQLMDDEDDDDNIADEELDYDEYIDPEDEDDSDGDDDDEEEEDDDDSSDDEGDDEDEDE
DEDSDVENEVPEPERVRIEEAKKFSDDIDKEFQKIMIESYNISARPQQGGARGKLNMPVP
RQVLVANEIKNNGNDSSKVSFGLLTRSGKKTNVKQLNLPSDNKFAESILKEKEHQRQDRQ
KIMNLVLQMDN |
NT seq |
3096 nt +upstreamnt +downstreamnt
atgtcctctgaattagataacagaaggaaagaattacttgatttaaatacaaaagcctgg
aatggcgagcatgtctacaaagtggcagccaaattggactcttccttgaaaaagaatacc
gcctttattaaaaagatcaagactggtgtcaactcagatcaatacaagtctgtgctcaag
gacatagaaactgtttccatcgaaaagtacttgtccgaagttattgtcaatttagtggaa
gcgttgtataaagtctccaaaagtgatgatatattggcggccattgagatcgtgtcagct
tttcaccaaagattcaccactctattcacgccacaattgttgatccatgttttggttggt
atatccaaccctgtaagatcccatcagagtgacatagatgaaaaggaagagcaatctaga
attgtacgtcaaagaaatttacttagattggttggagagttctatatcattggtgtcttt
cgtgttttgaaagattgtaataaagatctgattcctcatgaattgttacttaagtttggc
aagcaagcatcagaaccaatattaattgtcgtcattaaggatttgatgaattttgaatta
aaactgggtaattctttgagtgtaatccagtcatttttaaagagatttcagaacattata
tgtaacgatgacaacgttcttcttctgtttgaagttcgtaacgttttagtgcagatattt
tcaatttattctaaagctgtatttgatataactgtggatttaaagaagcgagtaaaacaa
ctcactgaaagaaacaacaaagcatcaatcagaacaggaagaattttagaagaaattcaa
gtagaattggatgatgtaaaatcgagatatgaaaaattcaaactgactgcagaattttta
tcagatacattggatattcctccgttgaattggaatttagatgaagaagacaccaagcag
gaacctgattccgtggtagaactagtcaaatcaaagtctttgaacgaagacgatcttaat
ggtgtatgggaagatatcaaagaaaagacattctatactgtaataccgctgttgggtgaa
attatggattctacttctatggaaaattctaaatcggtttcttcaaaagatggtgaaaga
attcaagattttttgaatcgacttgaagatgttggggctaatgacttggagcagttagtg
gttgagtttaataatttgaatttgaataacaaagcaaccaagaatagaattatgaggttc
tttattgaaacttccaatgttagcaatttgaaatattatgctcgatttttgaaaataaac
gaaatcaacttgtctgacttgattgaagaattgattacctatttagacaagggtttcaga
catcaactttaccaaaacaagttgaacttcaagaatattttattctttgttgaattgatt
aaatttaaaatggttcctattcatttaatttttcacaagattagaacattaacacttaat
atatctgccaccaataacattgatatattggcggtgttctatgaaaacgtaggtagattt
ttaatgaatgaacctgaatataaggatttgatggttgaaatgattgaattgttaaaagaa
aagctgaagaaatcaaatttgaaaatcaatgacaaattagccatcaacaatttactttta
attgtcaaccctcctgcaaataccaaagttcaaagagaaaaatctaccctttcattaaag
caacaattcattcaacgtttaattcgggtagaattagatgcaaaatctgttcccgttatc
attcgattacttaacaaattgcatatccaaacagatgaagaaagctgtgatactgttttg
gactgttttgctcatcctgaattggtaaattatgacaatcttccagcattggcagaagtg
ttgcaaatgtattctaaaaaccacaagaaaattgtggtttataccattgatactttgatt
gaaaatattattcgtggattggaattgaatgactataggatgaatagagtcagaatgtcc
cagattaaacttgttgctgaattatataacaagaaaatagtccagtttaagttgcttaat
gatttattgtatcgaattctttgttctggtcatcctaacaatcaaccattaccaaataat
tgggaagtcgagattgacttgcctgacaattacttcagaattcagttgtgttgcttattg
cttctttctataaaatcgataattgttgattctgatatttccccaaagaagaaatcgcct
gctaagcaagcatctgatcttaaaaagaaaaacgaaatcaacaaagaattattaggtgtt
tttactacctttttgcaatattacatattttgtaagcaaactccacttcctgtggaactt
cagttcaaattaacagatttgtttgcaaaatatgaggatgtgtctactgtcaaacgctac
gaaactatcagagaagtggtccagaagcttcaagagctgattcaaaccaagaaggaggtt
gagtctcaacttatggatgatgaagatgatgacgacaatattgctgatgaagaattagat
tatgatgaatacatcgatccagaagatgaggatgatagtgatggtgacgatgatgatgaa
gaggaggaggatgatgatgactcttcagatgatgaaggcgacgatgaagatgaagatgag
gacgaagacagtgacgtggaaaatgaagtgcccgaacctgaaagagtaaggatagaggag
gctaagaagttctcggatgacattgataaagagttccagaaaattatgattgaatcatac
aacatttctgcaaggccgcaacaaggtggtgctagaggtaaactaaacatgccagtgcca
cggcaagttcttgttgccaatgaaattaaaaacaatggaaacgattcttccaaggtctcg
tttggactattaacaagaagtggtaaaaagacaaatgtaaagcaattgaaccttcctagc
gataacaaatttgctgaatctatattaaaagagaaggagcatcaaagacaggataggcag
aaaattatgaacttggttttacaaatggataattaa |