Spathaspora passalidarum: SPAPADRAFT_72459
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Entry
SPAPADRAFT_72459 CDS
T03101
Name
(RefSeq) DNA polymerase zeta
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SPAPADRAFT_72459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_72459
Enzymes [BR:
spaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPAPADRAFT_72459
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
SPAPADRAFT_72459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
POL3_N
zf-C4pol
REV3_N
DZR_2
Motif
Other DBs
NCBI-GeneID:
18875436
NCBI-ProteinID:
XP_007376489
JGI:
72459
UniProt:
G3ARA4
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MRSLDSLRVQINDYDTYQSYPTRLDQYYSKVLQVPIIRIYGSITVDENIISRNYLSPTKK
KHKHKSDTPSYVFNVVIHVHNFYPYLYVDCRDQDYAKLSQRSHINKVIDHLEEALKISYA
NGRYRKKNEEDLSEDDDDQYEAPSTTSYKQSSTKRRYIANVSICKAVPMYGFQIGYNLFY
KISLLSPNYKPRLTKLFQENKLSLHNIGREDNNKTRNYDAHYVFEAHIPHLLQFLTDFNL
FGCGWLYIDKDHIRDGSNTKSLYFRSPIVNEALKSAYTKTQFDVLLRYLTNFVTHDNVLK
GNDLDNEGIGPFTRIGKSVLEIDISTSGITNRTWLSPRQLHDNFTERKEYDEYNASIQDG
KNPQHGYKYDEFGNPRIYLSSLKQIYNDLKYQCDIRNSSLELYSDVLATTNELSYFGTGS
TNWSNQQRLNELLEYAIQLTGSNELDMEKYADTYLTNLKSRKINGNDMFDKFKTSFDLVD
YEKELQYHNIPMRPGIDINNISHSSSSIEDITFTPSLEGTNHMGLNIGDNCYEVVIPDSV
KPENINNTFQKAGKLKINYQDPFYDNLNDIPTKPFVFANKKIVVPLKDSSSIPMTSSTKM
IHDNLQDDTETRKCIRSRKFYTWQYLQDPPSKQNVQTWAKLEEEKLQRRALKYGSQDEPG
ITQSYDFKFSYNSMKIARRPNGYNSLTCFSMEIHADPPNSKLTVDPLRDPISIVFYSFDD
KNGMFNHFEYTSGILIFNTRKYSEQFISQLSSSLKKNIELFDDEVEMTARLVQLIEIFDP
DILAGYEINAMSWGYIIERLRNVFDINILADFSRGSDKSNGKFGDRWGYTHTSNIEINGR
HMFNVWRLLRSDLSLTSYSLENVSYHLLHRSLPRYSNYQLSQWLSTGTFSNVLVALSYYS
TRIDMVIKIIEVQELITRNVEHSRLIGIEFNANFYRGSQFKVESILARLTKSESLLLNSP
SKQQKSPLVVLDFQSLYPSIMIAYNYCYSTLLGKLNNFSPNMNDIGYLDNLKIPPGMIDL
LKKDNAINISPNGFIFVKSNVRKSILAKMLEEFLALRIKVKAVTKSFRDDTELTRVYNSR
QLALKLIANVTYGYTSATFSGRMPNSDISDAIVSTGREILMKSIELIEAGNYGAKVVYGD
TDSLFVYFPGKSKDEAFKLGKSIAQYITSVFPDPVKLKFEKVYHPCVLLTKKRYVGYAYE
YEDQKVPKFDAKGIETVRRDGIPAQSKMTEKALRILFETQNLSKVKEYTLKQFYKISINK
ISVQDFCFAKEVRYGTYKNEKYLPPGAVVANKMVEDDPRKEPQYRERVPYVIIQDATKHR
IKDRCISPEDLIASYKTDKPLMLDYEYYITRVLIPPLARVFNLLGVDVKGWYRELPSFSQ
SRSRLLRNDGLLQSGVLNSHTCLSCHEKLDLNNSMVCSSCTSDEQQLVATICSECRENEL
RVRKLEKLCKDCVYSAFGNKGNNITNQSAENCSNKDCSVYYKKFRSQNDRDLSKFPGTYV
QHRPLDHQSLLHPSIQCRD
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgagatcacttgacctgttgcgcgttcaaatcaatgactatgacacgtatcaaagctac
ccaacgcgtttagaccagtattacagtaaggtcttacaagttcctataattagaatatat
ggatctataactgttgatgagaatattatctcgcgaaattacttgtcaccaactaagaag
aaacataagcacaaatcagacactccttcttatgtgtttaacgtcgtcattcatgttcat
aatttctacccatatctttacgtggattgcagagaccaagattatgccaaattatcccag
agaagtcatattaacaaagttatagaccatttggaagaagctttaaaaatatcatacgca
aatggaaggtatagaaagaaaaatgaggaagacttactggaagatgatgatgaccaatat
gaagcaccatcaaccacttcctacaaacaatcttctaccaaaagaagatatattgccaat
gtatcaatttgtaaggctgttccaatgtatggatttcagataggatataatctattttat
aaaatatctttactatcaccaaactacaaaccacgactaaccaagttatttcaagagaac
aaactctcattgcataatattggcagagaagataacaataaaacaagaaattatgacgca
cattatgtgtttgaggctcatataccacatctattgcaatttttaactgactttaacctc
tttgggtgtggttggctctacattgataaagatcatattcgcgatggatcaaatacaaag
agtttgtatttccgatcaccaattgttaacgaggctcttaaatcagcgtataccaagaca
cagtttgacgtgttattgcggtatctaactaactttgtcacacacgacaatgtattaaag
ggaaacgatttggataacgagggaataggtccattcacaagaattggaaaatcagtatta
gagattgatattagcaccagtggtataaccaatagaacatggttatctccaagacaacta
cacgataacttcacggagagaaaagagtatgatgagtataatgcctcgattcaagacggt
aaaaatccacaacatgggtataaatatgatgaatttggcaatccaagaatttacctatcc
tcattaaaacagatatataatgatttgaaataccagtgtgatataagaaattcgctgctt
gaattatatagcgatgtgcttgccactacaaacgaactttcgtattttggaaccgggtca
acaaattggtctaatcaacaaagattgaatgaattacttgaatatgcaatccaactaact
ggttcaaacgagttggatatggagaagtatgccgatacttatttgactaacttaaaatca
aggaaaataaatgggaatgatatgtttgacaagttcaaaacttcatttgatctagtggat
tatgagaaggaacttcaatatcataatataccaatgagaccaggaatagatattaataat
ataagccactcttcttcttccattgaagatatcactttcaccccatcattggaagggact
aatcacatgggactaaatattggagataattgttatgaagtcgttattccagactcagtt
aagcccgagaatataaacaacacattccagaaagcagggaaattgaaaattaactaccag
gaccctttctacgataatttaaatgatatccctacaaaaccatttgtgtttgcaaataaa
aaaattgtagtgccattgaaggattcaagtctgattcccatgacgtcactgactaaaatg
atccacgataatctccaggatgatacagaaactagaaaatgtataagatcgcggaaattc
tatacttggcaatatctccaggatcctcctctgaaacagaatgttcaaacttgggctaaa
ttagaggaagagaagttgcaacgcagggcgttaaaatacggatctcaggatgagccagga
ataacccaatcctatgatttcaaatttagttacaactcgatgaaaatagcccgacgcccg
aatgggtacaactccttgacttgtttcctgatggaaattcatgctgatccacctaactcc
aaattaacagtagatccattacgtgatcctatttcaatagtgttttattcctttgatgac
aagaatggaatgtttaaccattttgaatacacgtctggtattttgatatttaatactaga
aaatatagtgaacaatttatttcgcaactttcttctagtttaaaaaagaatattgaacta
tttgatgatgaagtggaaatgacagctaggttagttcagttaatcgagatatttgatcct
gatattttagctggttatgaaatcaatgcaatgtcatggggttatatcattgaaagactt
cgcaatgtatttgatattaacatattggctgacttcagtcgtggatctgataagagcaat
ggtaaatttggagatagatggggatatacgcatacctccaatattgaaattaacggacgt
catatgtttaatgtttggagattattaagatctgatcttagtttgactagttattcacta
gaaaatgtgtcttatcatttgttacatcgttcattacccagatatctgaattatcaattg
agccaatggttactgactggaacatttctgaatgtccttgtggcgttatcgtactattcc
accagaattgatatggtgattaagattattgaggtccaagagttaattactaggaacgta
gaacattctcggttgatcgggatcgaattcaatgcaaatttctatcgtggttctcaattc
aaagttgaatcgattcttgcacgattaaccaaactggagagtttattattgaattctcct
tctaaacaacaaaaatcacccttggtggttttggattttcaatcattatatccttccatt
atgattgcctataattattgttactcgacgttgcttggaaaattgaacaacttcagtccc
aacatgaatgatattggttatcttgacaacctcaagatcccacctggtatgattgatcta
cttaagaaagacaatgctattaatatatcaccaaatgggtttatctttgtgaaaagtaat
gttcgaaaatcgatattggcaaagatgttggaagaattcttagctctccgaattaaagtg
aaagcagtaacaaagtcattccgggacgatactgaattgactagagtctataactcgaga
caacttgctttgaaattaattgctaatgttacgtatgggtatacctccgctacattcagt
ggaagaatgcccaactctgatatttcagatgctattgtatcgactgggagagaaatccta
atgaagtctattgaattaattgaagctggtaactatggtgctaaagtagtttatggtgat
accgattcgctatttgtttatttcccaggtaaatctaaagatgaagcgtttaaattggga
aaatcaattgctcaatatattactagcgtcttccctgatccggtaaaattaaagtttgag
aaggtctaccatccatgtgtgcttttgacgaagaaacgttatgtaggttatgcatatgag
tatgaagatcaaaaagttcccaaatttgacgccaagggtatagagactgtaagaagggat
ggtattcctgctcagctgaaaatgaccgagaaggctttacgaatattatttgaaacacaa
aacctttctaaagttaaggaatacactttgaaacaattttacaaaatatcaatcaacaaa
atttcggttcaggatttctgctttgctaaggaagttaggtatggtacgtacaagaatgaa
aaatatttaccaccgggggcagtggttgctaataagatggtggaagatgatcctcggaaa
gaacctcaataccgagagagagtgccatacgtaatcatacaagatgctaccaaacacagg
attaaagatcgttgtatttcaccagaagatctcatagcttcatataagacagataaacct
ttgatgttggattatgaatattatatcactagagtacttatcccgcctttggcacgagtg
tttaatttgcttggagttgatgtgaaaggatggtatcgagagttgccttcattttctcaa
agtcgtagtcgattacttcgaaatgacggattgttgcagagtggagtacttaattcccat
acttgccttagttgtcacgagaaattggatcttaataattcaatggtttgtctgagttgc
acaagtgatgaacaacaacttgttgcaactatttgtctggaatgtcgagagaatgaattg
agagtcaggaaacttgagaaactatgtaaggactgcgtttacagtgcatttggtaataaa
ggaaacaatataaccaaccagtctgctgagaactgttcgaataaggactgttctgtgtac
tataaaaaatttaggagtcaaaatgatcgtgacctctccaagttcccaggaacatatgtc
caacataggccattggatcaccagagtcttttgcacccatccatccaatgtcgggactaa
DBGET
integrated database retrieval system