Spathaspora passalidarum: SPAPADRAFT_72826
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Entry
SPAPADRAFT_72826 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAPADRAFT_72826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_72826
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPAPADRAFT_72826
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SPAPADRAFT_72826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18875457
NCBI-ProteinID:
XP_007376959
JGI:
72826
UniProt:
G3ATG3
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSARKLQQEFDKTNKKIAEGLSSFDDIYTKLTTTEISSQKEKLESDLKKEIKKLQRSREQ
LKSWLSDSSIKLDKNLLQENRTRIEHAMDQFKDLEKSSKIKQFSNEGLELQSQKTKFSRF
GGDGDDSKRVEALNYINDIIEQLNQQNETMEQEIESLGGQSKKGKGGASTSYAVQSSIDD
FKYKIERNNTHIEKLENILNNLEEDKLDPAKIDDIKDDLEYYVENNQEEDYVEYDEFYDQ
LEVDEDEDVVEVQGSLAQMAAETINEEQQQQQQQQQQQPQPQPQSAKPQPGSATPAAAPA
TVAQGSSPSPSTAGATTATSSGSTPNKRKPSIVPAPAPPPITAYSSAIKAAQQQIQNTPP
PSNVAPATASAAPTTASSSASSTPAKMPPPGLNQPKSQSASPLISKPKLAGSDDDSDTDA
ISRISSIIQSRLNNPLPFTSISNLVESSLLNCPDSFDAEKPRQYIPINIHPSSIDYPQEP
MYELNSANYMRKFDNDTLFFCFYYSEANDSFGKWNAAKELSKRGWIFNTELKQWFLKDNK
NRSMSVIQKEEEAEHATVDDDEANYKYFDYEKTWLTRRRENYRFSKELRKTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaggaaactacaacaagaattcgacaagaccaacaagaagatcgcggaagga
ttatcgtcgtttgacgatatctacaccaaactcaccactacggagatatctctgcagaag
gagaagcttgaaagtgatctcaagaaggaaatcaagaaattgcaaaggctgagagaacaa
ttgaagtcatggttgagcgacagcagcatcaagctcgataagaacttgctccaagagaac
cgtaccaggatcgaacatgccatggaccagtttaaagatttggaaaagtctctgaagatc
aaacagttttctaatgaagggttggaattacaaagtcaaaaaaccaaattctctaggttt
ggtggtgatggcgacgattctaaacgtgtagaagcgcttaattatatcaatgacattatt
gagcaattgaaccaacagaatgaaaccatggaacaagagatagaatccttgggtgggcaa
ctgaagaaggggaaaggtggtgcatctacttcttacgcggtacaatcgtcaattgatgac
ttcaagtacaagattgaaaggaataatactcatattgagaagttggagaatattttgaat
aaccttgaagaagacaaattggatcccgccaagattgatgacatcaaagatgatttggaa
tattacgtggaaaacaaccaagaagaagattatgtggagtatgatgagttttatgaccaa
ttggaagtggatgaagatgaagatgtggttgaagtacaaggatcattagcccaaatggct
gctgaaactataaatgaagaacagcagcaacaacaacaacaacaacaacaacagccacaa
ccacaaccacaatcagctaaaccgcaacctggttctgctacccctgcagcagcaccagct
accgtagctcaaggttcctctccttccccatccactgcaggtgccacaactgccacatct
tcaggcagcaccccaaataaaaggaagccttcgattgtgcctgcacctgccccacctcca
atcacggcgtattccagtgccataaaagcagcacaacaacaaattcaaaacacgccgcca
ccatccaatgttgctccagctacagcttccgccgctcctacaactgcatcatccagtgcc
tcgtctactcctgccaaaatgccacctccaggcttgaaccaacctaaatcacaatcggca
tctccattaatcagtaaacctaaacttgccggttcagatgatgattctgacaccgatgcc
atctcgcgaatctcgtcgattattcaatcgcggttaaacaatccattgccctttacttct
ataagcaaccttgttgaatcgtcactattaaactgtccagattcctttgatgcagaaaag
ccaagacaatacattcctatcaatatccacccttccctgatcgactaccctcaggaacca
atgtatgaattgaacagtgccaattatatgaggaagtttgacaatgacacattgttcttt
tgcttttactacagcgaagccaatgatagctttggcaaatggaatgcagccaaggaattg
tctaaacgcgggtggatattcaatactgagttaaaacaatggtttttgaaggataacaag
aacagatctatgtcggtaatacaaaaggaggaggaagctgagcatgctactgttgatgat
gacgaagctaactataagtatttcgattatgaaaagacatggttgactagaagaagagaa
aattataggttttctaaggagttgagaaaaacattttag
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