Streptococcus parasuis: KQ224_02440
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Entry
KQ224_02440 CDS
T07585
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spab
Streptococcus parasuis
Brite
KEGG Orthology (KO) [BR:
spab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spab03009
]
KQ224_02440 (rlmD)
Enzymes [BR:
spab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KQ224_02440 (rlmD)
Ribosome biogenesis [BR:
spab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KQ224_02440 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_15
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
RrnaAD
N6_N4_Mtase
DOT1
PCMT
ComR_TPR
PrmA
Motif
Other DBs
NCBI-ProteinID:
QWV86991
LinkDB
All DBs
Position
complement(482130..483488)
Genome browser
AA seq
452 aa
AA seq
DB search
MFKKNDIVEVEIIDMTHEGQGVAKLDGFVFFVDNALPGENIRMKILKLKKNIGFGKVEEW
LSFSPNRNQSLDLTYLRTGIADLGHLNYAAQLEFKRKQVETSLRKIAGISNIEVNDTIGM
NHPVAYRNKAAVPVRRVNGQLETGFFRKNSHDLVPIEDFYIQHKEIDALILATRNLMRQL
DLKPYDEIEQTGLIRNIVVRRGHYSGQLMLIIVTTRPKIFRIETLIERLTSQFPNLVSVI
QNINDQNTNAIFGQDFRLLYGSETIVDTMLGNEFEISAPSFYQVNTEMAEKLYQTAIDFA
ELSADDVVIDAYSGIGTIGLSFARQVQHVYGVEMVEKAVLDSQKNAARNGIENVTYVCDS
AESAMKKWVMAGIKPTVIFVDPPRKGLTDSFIRASASVEPEKIVYISCNVATMARDVKLY
EELGYRLTKVQPTDLFPNTHHIEVVGLLEKRI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaaatgatattgttgaagtagaaattattgacatgacccatgagggacaa
ggtgtcgcaaaattagacggatttgtcttttttgtagacaatgctctaccgggtgaaaat
attcggatgaaaattttaaaactgaagaagaatattggttttggtaaggtagaagaatgg
ctgagcttttcgccaaatcgcaatcagagccttgatttgacctatttaagaacaggtatt
gctgatttgggtcatttgaattatgctgctcaacttgaatttaagagaaagcaagttgaa
actagtttgagaaagattgcaggtatctcaaatattgaggtgaacgatacaatcgggatg
aatcatcctgtggcttaccgtaacaaggcagctgtgcctgttcgtcgtgtcaacggccaa
ttagaaacaggttttttccgaaaaaattctcacgatttagtgccaattgaagatttttat
attcagcacaaggaaattgatgccttgattttggctactcgtaatcttatgcgtcaattg
gatttaaaaccttacgatgaaatagaacaaactggtctgatcagaaacattgtcgttcgt
cgtggccattattcagggcaactcatgttgatcatcgtgacaaccaggccaaagattttt
cgtattgaaaccttaatcgaacgcttgaccagtcagttcccgaatcttgtctcggttatt
cagaatattaatgatcagaacaccaatgcgatattcggtcaagatttccgcctcttgtac
ggtagtgaaacaatagttgatacgatgttgggcaatgaatttgaaatttcagccccttct
ttctatcaagtcaatactgaaatggctgaaaaactatatcaaacggctattgactttgct
gaactatcggcagatgatgttgtaattgatgcttattctggtatcgggacgatcggtcta
tcttttgcaagacaagtccagcatgtgtatggagtggaaatggttgaaaaggctgtcctt
gatagccagaaaaacgccgctagaaatggtattgagaatgttacctacgtctgtgatagc
gctgaatcggctatgaaaaaatgggtgatggctggcattaaaccgactgttatctttgtt
gatccgccaagaaaaggtttgacggatagttttatccgtgccagtgcatctgttgagcct
gaaaaaattgtctacatttcctgtaatgtagccacgatggcgcgtgatgtaaagctctat
gaagagttagggtatcgattaaccaaagtacagccgacggatttatttccgaatacgcat
catatagaagtagtcggtttgttagaaaaacgcatttag
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