Streptococcus parasuis: KQ224_07595
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Entry
KQ224_07595 CDS
T07585
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spab
Streptococcus parasuis
Pathway
spab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KQ224_07595 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spab03021
]
KQ224_07595 (rpoC)
03400 DNA repair and recombination proteins [BR:
spab03400
]
KQ224_07595 (rpoC)
Enzymes [BR:
spab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KQ224_07595 (rpoC)
Transcription machinery [BR:
spab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KQ224_07595 (rpoC)
DNA repair and recombination proteins [BR:
spab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KQ224_07595 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QWV85915
LinkDB
All DBs
Position
1451605..1455249
Genome browser
AA seq
1214 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPERDGLFDEVIFGPTKDWEC
SCGKYKRIRYKGITCDRCGVEVTRAKVRRERMGHIELKAPISHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGTFVAKMGAEAIQDLL
KQVDLPKEIAALKEELKTATGQKRIKAVRRLDVLDAFYKSGNKPEWMILNILPVIPPDLR
PMVQLDGGRFAASDLNELYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIAGNVKAAKRLIERGDDRIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMVFKDADEAIMAYRNGYVHLHTRVGI
ATDSLDKPWKDNQKHKVMMTTVGKILFNAIMPEGLPYLQEPNNANLTEGTPDKYFLEPGS
DIKAAIAELPINQPFKKKNFGNIIAEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGI
ADIPVIDNKAEIIEESHERVEQIKKQFRRGMITDDERYAAVTDEWRSAKEKLEKLLVEKQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLE
ERLQGRYTKKTVKHPETGAVIIGPNQLITEDIAREIVNAGVEQVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEI
FEARNPKGEAVITEVKGEVIAIEEDASTRTKKVFVKGKTGEGEYVVPFTARMKVEVGDQV
ARGSALTEGSIQPKHLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKV
RVMDPGDTDLLMGTLMDIADFTDANADVVIAGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTV
AEELAEEAKLAATE
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgatttaaaagtatgcaaatcacgttagcttcaccaagtaaggtt
cgttcatggtcttacggtgaggttaaaaaacctgaaacaatcaactatcgtacacttaaa
ccagaacgtgatggactatttgacgaagtaatctttggtccaacaaaagactgggagtgt
tcatgcggtaaatacaaacgtatccgttataaagggattacttgtgaccgctgtggtgtg
gaagtgactcgtgcaaaagtccgtcgtgaacgtatgggacacattgagttgaaagcacca
atttcacacatttggtatttcaaaggtattccaagtcgtatgggcttgaccttggatatg
agcccacgtgcgcttgaggaagttatctacttcgcggcttacgtggtgatcgatcctaaa
gatacaccgcttgagcacaagtcaatcatgactgagcgcgaataccgtgagcgtttgcgt
gaatatggctatggtacattcgttgccaaaatgggtgcagaagcgatccaagacctcttg
aaacaagtcgatcttccaaaagaaatcgctgcgttgaaagaagagttaaaaactgctact
ggacaaaaacggattaaagctgtgcgtcgtttggatgtattggatgctttctacaaatcc
ggaaataaacctgagtggatgattctcaatatcttgccagttattccaccagatttgcgt
ccgatggttcagttggatggtggccgttttgctgcatctgatttgaatgaattatatcgc
cgtgttatcaaccgtaacaaccgtttggctcgtctcttggaacttaacgctccagggatc
atcgtacaaaacgaaaaacggatgctccaagaagctgtagatgctttgattgacaacggt
cgccgtggtcgtccaattacaggaccaggtagccgtccacttaaatcactcagccacatg
cttaaaggtaaacaaggccgtttccgtcaaaacttgcttggtaagcgtgttgacttctca
ggacgttccgttatcgccgttggtccaactcttaaaatgtaccaatgtggtgtaccacgt
gaaatggctattgagctcttcaaaccgtttgtcatgcgcgaaatcgttgcccgtgatatt
gctggtaacgtaaaagctgcaaaacgtttgattgaacgtggtgacgaccgtatttgggat
atcttggaagaagtgatcaaagaacacccagttcttttgaaccgcgcacctacccttcac
cgtttgggtatccaggcttttgagccagttctgatcgacggtaaagcccttcgtttgcac
ccgcttgtctgtgaagcctacaacgccgactttgacggtgaccagatggcgattcacgtt
ccattgtcagaagaagcacaagcagaagcacgtatccttatgcttgcggcagaacacatc
cttaaccctaaagatggtaaaccagtcgtaacaccatctcaggatatggttttgggtaac
tactacttgaccatggaagatgctggtcgtgaaggtgaaggtatggtcttcaaggatgcg
gatgaggctattatggcttaccgcaatggctatgttcacttgcatactcgtgttggtatc
gcaacagatagccttgataaaccttggaaagataaccaaaaacacaaggtcatgatgaca
accgtcggaaaaatcttgttcaacgcgattatgccagaaggacttccatacttgcaagag
ccaaataatgctaacttgacagaaggaactcctgataaatacttcttggagccagggtca
gatatcaaggctgctattgcagaattgccaatcaaccaaccattcaagaagaaaaatttt
ggtaatatcatcgctgaaatcttcaagcgtttccgtacaactgaaacatcagccctgctt
gaccgtttgaaagacttgggttactatcactcaacacttgctggtttgacagtggggatt
gccgatattccggtcatcgacaacaaggctgaaatcattgaagaatctcacgaacgtgta
gaacaaatcaagaaacaattccgtcgtggtatgattactgatgatgagcgttatgcagct
gttacagatgaatggcgttcagctaaggaaaaattggaaaaacttctggttgaaaaacaa
gatccgaagaacccaatcgttatgatgatggactctggtgcccgtggtaacatttccaac
ttctcccagttggccggtatgcgtggtctgatgtcagctccgaacggacgtatcatggaa
ttgcctatcttgtctaacttccgtgaaggtctttctgttttggaaatgttcttctcaact
catggtgcccgtaagggtatgacggatacggccttgaagacagccgactcaggttatctg
actcgtcgtttggttgacgttgcccaagatgttattatccgtgaagacgactgtggaaca
gaccgtggtcttgacatccgttcaatcacagatggcaaggaaatgatcgagccacttgaa
gagcgtttgcaaggtcgttacactaagaaaactgttaaacatcctgaaacgggtgccgtt
atcattggtccaaaccaattgattactgaagatattgcccgtgaaattgtcaatgcaggt
gttgaacaagtaaccatccgtagtgtatttacatgtaatactcgccacggtgtctgccgt
cattgttatggtatcaacttggcgacaggtgatgcggttgaagtgggtgaagcagttggt
acgattgcagcccaatctatcggtgaacctggtacacagcttacaatgcgtaccttccac
acgggtggtgtagcctcaaacagcgatatcactcagggtcttcctcgtgtccaagaaatc
tttgaggcgcgcaatccgaaaggggaagcagttatcactgaggttaaaggtgaagttatc
gctattgaagaagatgcttctactcgtaccaagaaagtctttgttaaaggtaaaactggc
gaaggcgaatacgttgtaccatttacagcccgtatgaaagtcgaagttggtgatcaagtt
gcgagaggtagcgccctcactgaaggttctatccaaccaaaacacttgcttgaagttcgt
gatgtcttggcagttgaaacttaccttctttctgaagttcaaaaagtttaccgtagccag
ggtgtagaaatcggtgacaagcacattgaggtaatggttcgccaaatgcttcgtaaagtt
cgtgtcatggatccaggcgatacagatctgcttatgggtacacttatggatattgcagac
tttacagatgccaatgctgatgtggttatcgctggtggtgttccagcaacagctcgtcca
gtccttatggggattactaaggcatctcttgaaaccaactcattcttgtcagcagcatcc
ttccaggaaacaactcgtgtccttactgatgcagccattcgtggtaaacgtgataacctt
cttggtttgaaagagaacgttattattggtaagattatcccagcgggtacaggtatggcc
cgctaccgtaatcttgaaccacaagccatcaatgaagttgaaattattgaagatacagta
gcagaagagcttgctgaagaagcaaaacttgcagccactgaataa
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integrated database retrieval system
