Streptococcus parasuis: KQ224_10435
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Entry
KQ224_10435 CDS
T07585
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spab
Streptococcus parasuis
Pathway
spab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ224_10435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spab03019
]
KQ224_10435
Messenger RNA biogenesis [BR:
spab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KQ224_10435
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
P8
Motif
Other DBs
NCBI-ProteinID:
QWV86414
LinkDB
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Position
2019220..2020881
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AA seq
553 aa
AA seq
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MSTIKIMALGGVRENGKNLYIAEVNEHIFVLDAGAKYPENEQLGVDIVVPNFEYLEENKH
RVAGIFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELVKLLVKNNNATKKFNDFHVINE
KTEIDFGDSVVSFFQTTHSIPESLGVVIKTDQGNIVYTGDFKFDQAADKFYKTDFSRLAE
IGNEGVLALLSDSANADSNEQGASMHEAREEILNTIADWDGRIIVAAVASNIVRIQQIFD
AAEKTGRRIVLTGHDVENIVRTAIQLKKLHLVSEKLLVKPKDIAKYEDNELIILETGRMG
EPLNGLRKMAIGRHRYVEIKDGDLVYIVTTPSISKEAVVARVENLVYKAGGVVQSIAKKL
RVSGHGSSRDLQLMMNIMKPKYLFPIQGEYRQLEAHAKAATEIGMYPENIIIVKRGDVMS
FEDGDFVHNGAVPSGDVMIDGNAIGDVGNIVLRDRKILSEDGIFIVAITVNRREKKIISK
TKVNTRGFVYVKKSKDILRESSELVNATVENYFTKDSFDWTELKTAVRDDLTKFLFEQTK
RRPAILPVIMEVK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaattaaaattatggctcttggtggtgttcgggaaaatgggaaaaacctctat
attgccgaagtaaatgagcatatatttgttttggatgcgggtgcaaagtatccagaaaat
gaacaacttggtgtggatattgtcgttccgaactttgaatatttggaagaaaataagcac
cgtgtagcaggaatctttttatcgcatgggcatgcggatgctattggggcgcttccatac
cttctggaaaaagtgaaggtgccggtatttggttcgcatttgacgattgaattagtaaaa
ttgcttgttaaaaataataatgcaacgaaaaaattcaatgattttcatgtgatcaatgag
aagactgaaatagattttggggattcggttgtttctttctttcaaacaactcactccatt
cctgaaagcttgggagtggtgattaaaacggatcaaggcaatattgtatatacaggtgat
tttaaatttgaccaggcggcagataaattctacaagactgattttagtcgcttagctgag
attggtaatgagggagttttagcgctcttgtctgattctgccaatgcagacagcaatgaa
cagggtgcaagtatgcatgaagcaagggaagaaattcttaatacaattgcggattgggat
ggtcgtatcattgttgcagcagttgccagcaatattgtccgtatccaacaaatttttgat
gctgcggaaaaaacaggtcgccgtattgtcctaacgggtcatgacgtggagaacattgtc
cgtacagcaattcaactgaagaagttgcatcttgtcagtgaaaaactacttgtgaagccg
aaagacattgcgaagtatgaggacaatgagctcattattcttgaaacaggtcgtatgggt
gagcctttgaatggcttgagaaaaatggctatcggtagacacaggtatgttgaaatcaag
gatggagatttagtttatattgttacgactccaagtatttcaaaagaagcggtggtagcc
cgtgttgaaaacttagtgtacaaagctggtggtgttgtacaatccattgcgaagaaattg
cgcgtgtcaggtcatgggagttctagagatcttcaattgatgatgaatatcatgaagccc
aaatatcttttcccaatccaaggggaataccgtcaattggaggctcatgcaaaagctgct
actgaaatcggtatgtacccagagaatattatcatcgtcaaacgcggtgatgtgatgtcc
ttcgaagatggagactttgttcacaatggtgccgtaccttctggtgatgtgatgattgat
ggtaatgcaattggggatgttggaaatattgttctgcgtgatcgtaaaattctctctgaa
gacggcatctttattgtagcaattacagtcaatcgtcgtgaaaagaaaattatttctaag
acaaaagtcaatacccgtggatttgtctatgtcaagaagagtaaagatatcttgcgtgag
tcctcagagttagtaaatgcaacagttgaaaattactttacaaaagatagttttgactgg
acagagttgaaaactgctgttcgcgatgacctcactaaattcctatttgaacagactaaa
cgtcgcccagctattttgccagtgattatggaagttaaatga
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