KEGG   Streptococcus parasuis: KQ224_10435
Entry
KQ224_10435       CDS       T07585                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
spab  Streptococcus parasuis
Pathway
spab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KQ224_10435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spab03019]
    KQ224_10435
Messenger RNA biogenesis [BR:spab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KQ224_10435
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 P8
Other DBs
NCBI-ProteinID: QWV86414
LinkDB
Position
2019220..2020881
AA seq 553 aa
MSTIKIMALGGVRENGKNLYIAEVNEHIFVLDAGAKYPENEQLGVDIVVPNFEYLEENKH
RVAGIFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELVKLLVKNNNATKKFNDFHVINE
KTEIDFGDSVVSFFQTTHSIPESLGVVIKTDQGNIVYTGDFKFDQAADKFYKTDFSRLAE
IGNEGVLALLSDSANADSNEQGASMHEAREEILNTIADWDGRIIVAAVASNIVRIQQIFD
AAEKTGRRIVLTGHDVENIVRTAIQLKKLHLVSEKLLVKPKDIAKYEDNELIILETGRMG
EPLNGLRKMAIGRHRYVEIKDGDLVYIVTTPSISKEAVVARVENLVYKAGGVVQSIAKKL
RVSGHGSSRDLQLMMNIMKPKYLFPIQGEYRQLEAHAKAATEIGMYPENIIIVKRGDVMS
FEDGDFVHNGAVPSGDVMIDGNAIGDVGNIVLRDRKILSEDGIFIVAITVNRREKKIISK
TKVNTRGFVYVKKSKDILRESSELVNATVENYFTKDSFDWTELKTAVRDDLTKFLFEQTK
RRPAILPVIMEVK
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgagcacaattaaaattatggctcttggtggtgttcgggaaaatgggaaaaacctctat
attgccgaagtaaatgagcatatatttgttttggatgcgggtgcaaagtatccagaaaat
gaacaacttggtgtggatattgtcgttccgaactttgaatatttggaagaaaataagcac
cgtgtagcaggaatctttttatcgcatgggcatgcggatgctattggggcgcttccatac
cttctggaaaaagtgaaggtgccggtatttggttcgcatttgacgattgaattagtaaaa
ttgcttgttaaaaataataatgcaacgaaaaaattcaatgattttcatgtgatcaatgag
aagactgaaatagattttggggattcggttgtttctttctttcaaacaactcactccatt
cctgaaagcttgggagtggtgattaaaacggatcaaggcaatattgtatatacaggtgat
tttaaatttgaccaggcggcagataaattctacaagactgattttagtcgcttagctgag
attggtaatgagggagttttagcgctcttgtctgattctgccaatgcagacagcaatgaa
cagggtgcaagtatgcatgaagcaagggaagaaattcttaatacaattgcggattgggat
ggtcgtatcattgttgcagcagttgccagcaatattgtccgtatccaacaaatttttgat
gctgcggaaaaaacaggtcgccgtattgtcctaacgggtcatgacgtggagaacattgtc
cgtacagcaattcaactgaagaagttgcatcttgtcagtgaaaaactacttgtgaagccg
aaagacattgcgaagtatgaggacaatgagctcattattcttgaaacaggtcgtatgggt
gagcctttgaatggcttgagaaaaatggctatcggtagacacaggtatgttgaaatcaag
gatggagatttagtttatattgttacgactccaagtatttcaaaagaagcggtggtagcc
cgtgttgaaaacttagtgtacaaagctggtggtgttgtacaatccattgcgaagaaattg
cgcgtgtcaggtcatgggagttctagagatcttcaattgatgatgaatatcatgaagccc
aaatatcttttcccaatccaaggggaataccgtcaattggaggctcatgcaaaagctgct
actgaaatcggtatgtacccagagaatattatcatcgtcaaacgcggtgatgtgatgtcc
ttcgaagatggagactttgttcacaatggtgccgtaccttctggtgatgtgatgattgat
ggtaatgcaattggggatgttggaaatattgttctgcgtgatcgtaaaattctctctgaa
gacggcatctttattgtagcaattacagtcaatcgtcgtgaaaagaaaattatttctaag
acaaaagtcaatacccgtggatttgtctatgtcaagaagagtaaagatatcttgcgtgag
tcctcagagttagtaaatgcaacagttgaaaattactttacaaaagatagttttgactgg
acagagttgaaaactgctgttcgcgatgacctcactaaattcctatttgaacagactaaa
cgtcgcccagctattttgccagtgattatggaagttaaatga

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