Streptomyces pactum: B1H29_00215
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Entry
B1H29_00215 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_00215
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
MarR
Sigma70_ECF
MarR_2
HTH_Crp_2
HTH_3
IF2_N
HTH_24
GerE
NirdL-like_HTH
PCRF
Motif
Other DBs
NCBI-ProteinID:
AQS71702
UniProt:
A0A1S6JIZ0
LinkDB
All DBs
Position
complement(43223..44107)
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AA seq
294 aa
AA seq
DB search
MASEGPIGSLMATAQDVESALARVKRRTKTQPTPQQPLRTTSSDADRSDARAMFLQLRAM
QGGSPEYAELRNRLVRMYLPLVEHLARRFRNRDEPLDDLAQVATIGLIKSVDRFDPERGV
EFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQEQGRPPTVHELAT
KLSISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGVEEEALEGVEYRESLKPLL
ESLPPREKRILLLRFFGNMTQSQIAQEIGISQMHVSRLLARTLAQLRERLLAEE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaggaccgatcggatcgctcatggccacggcccaggacgtcgagtccgcg
ctggccagagtcaagcggcggaccaagacacagcccaccccccagcagccccttcgcact
acgtcgtccgacgccgaccgtagtgacgcgcgagcgatgttcctccaactgcgcgcgatg
caaggcggcagcccggagtacgccgagctgcgcaaccggctggtccggatgtatctgccg
ctcgtggagcacctcgcacgccgcttccgcaaccgcgatgagccgctggacgacctcgcc
caggtcgccaccatcggtctgatcaagtcggtcgaccgtttcgacccggagcgtggcgtg
gagttctccacgtacgcgaccccgacggtggtcggtgagatcaaacgccacttccgtgac
aagggctgggcagtgcgtgtacccaggcgccttcaggaactgcgccttgcgctcaccacg
gccactgcggagctgtcgcaggaacaaggccgaccgcccacggtccacgagctggccacg
aagctgtcgatctcggaggaggaagtcctggagggcctggagtccgcgaacgcgtactcc
acactgtcgttggacgtccccgacaccgacgacgagtccccggcggtcgcggacaccctg
ggagtcgaggaagaggcactcgagggcgtcgagtaccgcgagtccctcaagccgttgctg
gaaagcctcccgccgcgcgagaagcggatcctgctgctgcgcttcttcggcaacatgacc
caatcgcagatcgcgcaggagatcggcatctcccagatgcacgtctcccggctactggcg
cgcacactggcccagctgcgagagaggctacttgcggaggagtga
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