Streptomyces pactum: B1H29_08595
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Entry
B1H29_08595 CDS
T07142
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spac03016
]
B1H29_08595
Enzymes [BR:
spac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B1H29_08595
Transfer RNA biogenesis [BR:
spac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B1H29_08595
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AQS66976
UniProt:
A0A1S6J5E9
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All DBs
Position
2059331..2060515
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AA seq
394 aa
AA seq
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MLEPREGVPPVIADAAALAEVTAAFAAGSGPVAVDAERASGYRYGQRAYLVQLRREGAGT
ALIDPVACPDLSGLGAALSDVEWVLHAATQDLPCLREIGMVPTRIFDTELAGRLAGFPRV
GLGAMVENVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWARQEFDAIASAPPPEPRKDPWRRTSGMHKVRRRRQLAVVRELWQTRDRIAQRRDVSPG
KVLGDAAIVEAALALPVNAHALAALNGFGRVNRRQLEQWQVAVDRARGLSESQLPQPGQP
VTGPPPPRAWADKDPAAAARLTAARAAVTTLAERLNMPQENLITPDTVRRVCWEPPATVD
TESVAAALAGHGARPWQVEQVTPALVTALSQSVS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaaccacgggagggcgttccgccggtgatcgccgacgcggccgccctcgccgag
gtgaccgccgccttcgccgcgggcagcggccccgtcgccgtcgacgccgagcgcgcctcc
ggttaccgctacggccagcgcgcctatctggtgcagttgcgccgcgagggcgccgggacc
gcgctgatcgacccggtggcctgccccgacctgtccgggctgggcgcggcgctctccgac
gtggagtgggtgctgcacgcggccacccaggacctgccgtgcctgcgcgagatagggatg
gtgcccacccggatcttcgacaccgagctggccggccggctcgccgggttcccgagggtc
ggcctcggcgcgatggtcgagaacgtactgggcttcgtcctggagaagggccactcggcc
gtcgactggtccacccgcccgctgcccgaaccgtggctgcgctacgccgcgctcgacgtc
gaactcctcgtcgacctgcgcgacgcgctggagaaggagctggaccggcagggcaagctc
gagtgggcccggcaggagttcgacgcgatcgcctcggccccgccgcccgagccgcgcaag
gacccgtggcgccgtacgtccggcatgcacaaggtgcgccggcgccgccagctcgccgtg
gtgcgggagctgtggcagacccgggaccgcatcgcgcagcgccgcgacgtctctcccggc
aaggtgctcggggacgcggccatcgtcgaggcggcgctcgccctcccggtcaacgcgcac
gcgctggccgcgctgaacgggttcggacgggtcaaccgccggcagctcgagcagtggcag
gtggcggtcgaccgggccaggggcctgtccgagtcgcaactgccgcagcccggccagccg
gtgaccggtcccccgccgccgcgggcgtgggccgacaaggacccggccgccgcggcccgg
ctcaccgccgcgcgggcggcggtgacgacgctggcggagcggctgaacatgccccaggag
aacctgatcaccccggacaccgtgcgccgggtctgctgggagccgccggcgacggtcgac
acggagtccgtggccgcggccctcgccggccacggggcccggccctggcaggtggagcag
gtgacgcccgcactggtgacggctctgtcccagagcgtgtcgtag
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