Streptomyces pactum: B1H29_10525
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Entry
B1H29_10525 CDS
T07142
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
spac
Streptomyces pactum
Pathway
spac02020
Two-component system
spac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B1H29_10525
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B1H29_10525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_10525
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spac02035
]
B1H29_10525
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_10525
Bacterial motility proteins [BR:
spac02035
]
Flagellar system
Flagellar assembly proteins
Stator
B1H29_10525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AQS67306
UniProt:
A0A1S6J6D7
LinkDB
All DBs
Position
complement(2596310..2597152)
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AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDVDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPSESEVAVEMGIAVEDLHAVFSQLSLANVVAL
EELLHAGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLAGFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcagcgtgcgaccgcccgccccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgagcggctgcgggaacaactgatcctgcactactcgcccctcgtgaaatac
gtggcgggccgggtgagtgtgggactgccgcccaacgtcgagcaggccgacttcgtctcc
tcgggagtgttcggactgatcgacgcgatcgagaagttcgacgtcgaccgggagatcaag
ttcgagacgtacgcgatcacccggatccggggcgcgatgatcgacgagctgcgggcactg
gactggatcccgcggtcggtccggcagaaggcgcgcaacgtggagcgcgcgtacgcgacg
ctggaggcgcggctgcgccgcaccccgtcggagagcgaggtggccgtcgagatggggatc
gcggtggaggacctccacgccgtcttcagccagttgtcgctggccaacgtggtggcgctg
gaggaactgctgcacgccgggggcgagggcggggaccggctgagcctcatggacacgctg
gaggacaccgccgccgacaaccccgtggaggtcgccgaggaccgggaactgcggcggttc
ctggcgcgggcgatcaacacgctgccggagcgggagaagaccgtcgtcaccctctactac
tacgagggcctcacgctcgccgagatcgggaacgtgctgggtgtgacggagagccgggtc
agccagattcacaccaagtcggtgttgcaactgcgcgccaagctggcaggattcggccgc
tga
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