Streptomyces pactum: B1H29_10700
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Entry
B1H29_10700 CDS
T07142
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spac
Streptomyces pactum
Pathway
spac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1H29_10700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spac03400
]
B1H29_10700
Enzymes [BR:
spac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B1H29_10700
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B1H29_10700
DNA repair and recombination proteins [BR:
spac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1H29_10700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
DUF7573
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_recom
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AQS67337
UniProt:
A0A1S6J6E2
LinkDB
All DBs
Position
complement(2635053..2635913)
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVVHRTVQDAEVLHPRAVRRHIAGPDDFAQRLEGHRIGTPSRRG
KYLWLPLEDTGQAILAHLGMSGQLLVQPHEAPAEKHLRVRVRFTDALPTELRFVDQRTFG
GLSLHDTTPDGLPDVIAHIARDPLDPLFDDEAFHTALRRKRTTIKRALLDQSLISGVGNI
YADEALWRSRLHYERPTAAFTRPRTAELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCGTPMRRRPWMNRSSYFCPKCQRTPRITR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtagaggtcgtgcggcgcggcctggagcgctgggtcgtccat
cggaccgtccaggacgccgaggtgctgcacccgcgcgcggtacggcgtcacatcgccggc
ccggacgacttcgcccagcgcctcgagggccaccgcatcggcacgcccagccgccgcggc
aagtacctgtggctgccgctggaggacaccgggcaggcgatcctggcgcacctgggcatg
agcggccagttgctggtccagccgcacgaggcgccggccgagaagcacctgcgcgtccgt
gtccgcttcaccgacgccctgcccaccgaactccgcttcgtcgaccagcgcaccttcggc
ggcctgtcgttgcacgacaccacccccgacggactgcccgacgtcatcgcccacatcgcc
cgcgaccccctcgacccgctcttcgacgacgaggcgttccacacggcgctgcgccgcaag
cgcaccacgatcaaacgggccctgctcgaccagtcactgatcagcggcgtcggcaacatc
tacgcggacgaggccctgtggcgctcccgcctgcactacgaacgccccaccgcggccttc
acccgcccccgaaccgccgagctcctcggccacgtccgcgacgtgatgaacgcggccctc
gccgtgggcggcaccagcttcgacagcctctacgtcaacgtcaacggcgagtccggctac
ttcgaccggtcgctcgacgcctacggccgtgagggcctgccctgccggcgctgcggcacg
ccgatgcgccgccggccgtggatgaaccgatccagctacttctgcccgaagtgccagcgc
acgccgaggatcacacggtag
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