Streptomyces pactum: B1H29_12645
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Entry
B1H29_12645 CDS
T07142
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spac
Streptomyces pactum
Pathway
spac03420
Nucleotide excision repair
spac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1H29_12645
03430 Mismatch repair
B1H29_12645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spac03400
]
B1H29_12645
Enzymes [BR:
spac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1H29_12645
DNA repair and recombination proteins [BR:
spac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1H29_12645
MMR (mismatch excision repair)
Other MMR factors
B1H29_12645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AQS67656
UniProt:
A0A1S6J7D2
LinkDB
All DBs
Position
complement(3118079..3121648)
Genome browser
AA seq
1189 aa
AA seq
DB search
MPAHLTDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAAELAERVRKALIRAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRLGLEPTSRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLALDAELAEH
LVRPEELRTWDAGLLDSLHTVKLSNADLRKVPEAAAARRELADLVIRYRAAKRERDLLDF
GDQIALSAQLAGLPEVGRVLRDEFRVVLLDEYQDTSVAQRILLAGLFGDGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHADGGPATRQALSENRRSGGRLLDLANGLAEPLRAM
HAGVEALHPAPGAEQDGTVRCALLRTHAEEIDWIADSVAHLVRTGRAPGEIAVLCRTATD
FAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVSHARVEGDDDPDRRLAEAVEGVDPSEVISLADALDTFLETPLDGS
GDDDGLPFSPDARVRFARLATELRDLRRALSDPLMDVLHRILAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAASDGEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVTGTFPSGQGREKWTAQGKVLPHGLRGDADTLPEVGSWDSRGLKAF
HESMKEHQRTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSEFLTALYEHCAAGHG
EIEAWADGPAEDEENPALHRATADQAWPLPLDDAALARRRSAAETVLAHLDTLASHEDGR
LAAVHDPDTHDDPDWPPLEDEEAPQDAEVLHEGEDPGDPDWTDEGPDDWDSWTADRPTAQ
PAPGPPTPDVSPAIPRQATPSGPPGGTDLPRPHREEPRPGQAAPAFLTPEEARTVASWDR
DLDALAGELLRARESVTEVPLPASLTASQLLALSADPDGFAQELARPMPRPPQPAARRGT
RFHAWVEARFEPLTLPLLEPEELPGSDAEITDERDLEFLKDAFERTEYARRTPYRVEAPF
QLSLAGRVVRGRIDAVYKEGDGETVTYEIVDWKTNRAATADPLQLALYRLAWAEQQHVPL
ESVTAAFLYVRTGEVVRPDGLPDRAALENLLLADPVGDEPHDQGVGAGR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcccatctcaccgatcccgagcagctcaaagagctcctcggcatccccttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagacgaccgtgatggccgcgcgcgtggtgtggctggtcggtaccggccag
gtcgccccggagcaggtcctcggtctcaccttcaccaacaaggcggccgccgaactcgcc
gaacgcgtccgcaaggcgctgatcagggcaggcgtcaccgacccggacgtgatcgacccg
gacaacccgccgggcgaaccggtgatctcgacgtaccacgccttcgcgggccgtctcctg
accgaccacggcctgcgcctcggactggagccgacctcccggctgctcgccgacgccacc
cgctaccagctcgccgcgcgtgtcctgcgcgaggcccccggcccctaccccgcgctcacc
cgctccttcgccgacctggtcagcgacctcctcgcactcgacgcggagctcgccgagcac
ctcgtacgccccgaggaactgcgcacctgggacgccggcctcctggactccctgcacacc
gtcaagctcagcaacgccgatctgcgcaaggtccccgaggccgccgccgcgcgccgtgaa
ctcgccgacctggtgatccgctaccgggccgcgaagcgcgaacgggacctgctcgacttc
ggcgaccagatcgcgctgtccgcacaactcgccgggctcccggaggtgggccgcgtcctg
cgagacgagttccgggtcgtgctgctggacgagtaccaggacacctcggtggcccagcgc
attctcctcgcgggcctgttcggcgacggcacgggccaccccgtgaccgccgtgggcgac
ccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctcgacgacttcccc
gagcacttcgcgcacgcggacggcggccccgccacccggcaggcgctcagcgagaaccgc
cgcagtggcggccgcctcctcgacctcgccaacggcctcgccgagcccctgcgcgccatg
cacgcgggcgtggaggccctgcatcccgccccgggcgccgaacaggacggcacggtccgc
tgcgccctgctgcgcacccacgccgaagagatcgactggatcgccgactccgtcgcccac
ctcgtgcgtaccggcagggcgcccggcgagatcgccgtcctgtgccgcacggcgaccgac
ttcgccgagatccagggcgcgctggtggcccgcgacgtccccgtcgaggtcgtgggcctg
tccggactgctgcacctgcccgaggtggccgacctggtcgccgtctgcgaagtcctccag
gaccccggcgccaacgcctccctggtccgcctgctcaccggcccgcgctggcgcatcggt
ccgcgcgatctcgccctcctgggccgccgcgcccggctcctggtgagccacgcgcgcgtg
gagggtgacgacgaccccgaccggcggctcgccgaggccgtcgagggcgtcgacccgtcc
gaggtgatatcgctcgcggacgccctcgacaccttcctggagacgccgttggacggcagc
ggggacgacgacggcctgcccttctcgccggacgcgcgcgtgcggttcgcacggctggcc
accgaactgcgcgacctgcgccgagccctgtccgacccgctcatggacgtactgcaccgg
atcctcgccgtcaccggcctggaggtggaactgtccgcctccccgcacgcactggccgcc
cgtcgccgcgagaccctgtcgaacttcctggacgtcgccgcgtccttcgccgcgagtgac
ggcgaagcctccctgctcgccttcctgggcttcctgcgcaccgccgcccagtacgagaaa
ggcctcgacaacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcgcacaag
tccaagggcttggagtgggacgtcgtcgccgtacccggcctggtcaccgggaccttcccc
agcggccagggccgcgagaagtggaccgcccagggcaaggtgctgccgcacggcctgcgc
ggcgacgccgacaccctgcccgaggtcggctcctgggactcccggggcctgaaggccttc
cacgagtcgatgaaggaacaccagcgcaccgaggaactgcgcctcggctacgtcaccttc
acccgcccgcgctccctgctgctgggctccggccactggtggggccccagccagaagaaa
cctcgcggaccgtccgagttcctcacggcgctgtacgagcactgcgccgccggacacggc
gagatcgaggcctgggcggacggacccgccgaggacgaggagaacccggccctgcaccgg
gcgaccgccgaccaggcctggcccctgccactggacgacgcggccctcgcccgccgccgg
tccgccgccgagacggtcctcgcacatctggacaccctcgcctcccacgaggacggccgc
ctcgccgccgtgcacgacccggacacccacgacgacccggactggccgccgctcgaggac
gaagaggcaccgcaggacgctgaggtactccatgagggagaggaccccggcgaccccgac
tggacggacgaaggtcccgacgactgggactcctggaccgcggaccgtcccaccgcccag
ccggcccccggcccaccgacgccggacgtcagccccgccatcccccgccaggcgactccg
tcgggaccgcccggcggcaccgacctgccccgcccgcaccgcgaggaaccgcgccccggg
caggccgcccccgccttcctcacccctgaggaggcccgcaccgtcgcctcctgggaccgg
gacctcgacgccctcgccggggagctcctgcgcgcccgcgagagcgtcaccgaggtacct
cttccggcgtcgctgaccgcctcccagctactcgccctgtccgccgacccggacggcttc
gcacaggagctggcccgtcccatgccccggccgccccagcccgccgcccgccgcgggacc
cgtttccacgcctgggtcgaggcccgtttcgaacccctgacactccccctgctggagccg
gaggagttgcccggcagcgacgccgagatcaccgacgaacgcgacctggagttcctcaag
gacgccttcgaacgcaccgagtacgcccggcgcaccccctaccgtgtcgaggcgccgttc
cagctctcgctcgccggccgagtcgtacgcggtcgcatcgacgccgtctacaaggagggc
gacggcgagacggtgacgtacgagatcgtcgactggaagacgaaccgtgccgccaccgcg
gacccgctgcagctcgccctctaccgcctcgcctgggccgagcagcagcacgtaccgctg
gagtcggtgacggctgccttcctgtacgtgcgcacgggcgaggtcgtacggcccgacggg
ctgccggaccgtgccgcgctggaaaacctgctgctggccgacccggtcggtgacgaaccg
cacgatcagggtgtcggcgcgggccgatag
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