Streptomyces pactum: B1H29_15530
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Entry
B1H29_15530 CDS
T07142
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spac
Streptomyces pactum
Pathway
spac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1H29_15530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spac03019
]
B1H29_15530
03400 DNA repair and recombination proteins [BR:
spac03400
]
B1H29_15530
Enzymes [BR:
spac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1H29_15530
Messenger RNA biogenesis [BR:
spac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1H29_15530
DNA repair and recombination proteins [BR:
spac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B1H29_15530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
TamB
Motif
Other DBs
NCBI-ProteinID:
AQS68158
UniProt:
A0A1S6J8V1
LinkDB
All DBs
Position
complement(3732208..3734214)
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AA seq
668 aa
AA seq
DB search
MGGTGVIGEMAETAQARDMDSEALATLHRVFGYEAFRGEQEAVVDHVVAGGDAVVLMPTG
GGKSLCYQIPSLVRPGTGIVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVVEAE
FLAGELDLLYLAPERLRLEGTLDLLSRGKISLFAIDEAHCVSQWGHDFRPDYLALSLLGE
RWPDVPRLALTATATHATHREITERLNMPAARHFVASFDRPNIQYRIVPKSDPKKQLLGF
LREEHPGDAGIVYCLSRNSVEKTAEFLSRNGVEAVPYHAGLDAGTRAAHQSRFLREEGLV
VVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQR
KLIQSGEGDEAFRRRAQSHLDAMLALCETAECRRGQLLAYFGQEPGPAGCGNCDTCLTPP
ETWDGTVAAQKVLSTVVRLKRERGQKFGAGQIIDILLGKRTAKVIQFDHDQLSVFGIGEE
LTEGEWRGVARQLLAQGLLAVEGEYGTLVLTETSGEVLRWEREVPLRKEPGKPATARSAG
GGRGDRKPKAAAAELPDELLPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATAWPTS
IGQLGGISGVGEKKLVTYGEGVLAVLAGLAGPVAAAEPEPGGPSVASLPGSDDEDGWPGQ
EPEPDDWM
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggacaggcgtgatcggcgagatggcagagacggcacaggcgagggacatggac
agcgaggcgctggccacgctgcaccgggtcttcgggtacgaggctttccgcggcgagcag
gaagcggtcgtcgatcacgtggtggcgggcggcgatgccgtcgtgctcatgccgaccggc
ggcggcaagtcgctgtgctaccagattccgtccctggtccggcccggcaccggcatcgtg
gtctcgcccctcatcgcgctgatgcaggaccaggtggacgcgctgcgggcgctcggtgtg
cgagccgggttcatgaactccacgcaggacttcgacgagcggcgcgtggtggaggcggag
ttcctcgccggcgagctggacctgctgtacctggcacccgagcggctgcgcctggagggc
accctcgatctgctctcccgcgggaagatctccctcttcgcgatcgacgaggcgcactgc
gtctcccagtggggccacgacttccggcccgactacctggccctgtccctgctcggcgag
cgctggccggacgtacctcggctcgcactcacggcgacggccacacacgcgacgcaccgc
gagatcaccgagcggctgaacatgccggcggcgcggcacttcgtcgcgagtttcgaccgg
cccaacatccagtaccggatcgtgccgaagtccgacccgaagaagcagctactgggcttc
ctgcgcgaggagcaccccggcgacgcgggcatcgtgtactgcctctcacgcaactccgtc
gagaagaccgccgagttcctgtcccgcaacggggtcgaggcggtgccgtaccacgcggga
ctggacgcgggcacccgcgcggcccaccagtcgaggttcctgcgggaggagggcctggtc
gtggtggcgaccatcgccttcggcatgggcatcgacaagccggacgtgcggttcgtcgcc
cacctggacctgcccaagtcggtcgagggctactaccaggagaccggccgcgccgggcgg
gacggcctgccgtcgaccgcctggatggcgtacggactcaacgacgtcatacagcagcgc
aagctgatccagtccggcgagggcgacgaggcgttccgccgccgggcccagtcccacctg
gacgcgatgctcgcgctgtgcgagaccgccgagtgccgccgcggccagctcctcgcctac
ttcggccaggaacccggcccggccggctgcggcaactgcgacacctgtctcaccccgccg
gagacctgggacggcacggtggcggcacagaaggtgttgtcgacggtggtgcggctgaag
cgggagcgcgggcagaagttcggcgcggggcagatcatcgacatcctgctgggcaagcgc
accgccaaggtgatccagttcgaccacgaccagctctccgtgttcggtatcggagaggag
ctgaccgagggcgagtggcggggcgtcgcccggcagttgctggcccagggactgctcgcg
gtcgagggcgagtacggcacgctggtgctgaccgagaccagtggggaggtgctgcggtgg
gagcgggaggtgccgctgcgcaaggagcccgggaagccggccacggcacggtcggcgggc
ggcggacgaggggaccgcaagcccaaggccgccgcggccgaactgccggacgaactgctc
cccgccttcgaggcgctgcgtgcctggcgcgcggagcaggcgcgtgagcagggtgtcccg
gcctacgtcatcttccacgacgccacgctccgggagatcgccaccgcctggcccacctcg
atcgggcagctcggaggcatcagcggggtcggcgagaagaagctggtgacttacggagag
ggcgtgctcgcggtgctggcggggctggccggaccggtcgccgccgccgagccggagccg
ggcggcccctcggtcgcctcccttcccggctcggacgatgaggacggctggcccgggcag
gagcccgagccggacgactggatgtag
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