Streptomyces pactum: B1H29_16110
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Entry
B1H29_16110 CDS
T07142
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spac03016
]
B1H29_16110
Enzymes [BR:
spac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
B1H29_16110
Transfer RNA biogenesis [BR:
spac03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
B1H29_16110
Prokaryotic type
tRNA splicing ligases
B1H29_16110
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AQS68258
UniProt:
A0A1S6J941
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All DBs
Position
complement(3853740..3854933)
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AA seq
397 aa
AA seq
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MSYVELPGAKVPIRMWADPATVEEGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDGPVDPG
RFHGLATAGWDDFWRRFDGVAEAVKFRRERAGKQMGTLGSGNHFVEICTDVTGSVWLMLH
SGSRNIGKELAEHHIGIARKLPHNQGLIDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
TLMMALLKDVVRKEFKKAKPAFEPEISAHHNYVAEERYDGIDLLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVKGLGNAKSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagctgccgggcgcgaaggtgccgatccggatgtgggccgacccggcg
acggtcgaggagggcgcgctccagcaactgcgcaacgtggcgaccctgccgtggatcaag
ggcctggcggtcatgccggacgtgcactacggcaagggcgcgacggtcgggtcggtcatc
gcgatgcggggtgccgtgtgcccggcggcggtgggcgtggacatcggctgcgggatgtcg
gcggtgcggacgtccctcacggcgaacgacctcccgggtgacctctcgcggctgcgctcg
aagatcgagcaggcgattccggtggggcgcgggatgcatgacggccccgtggacccgggt
cggttccatgggctggcgacggcggggtgggacgacttctggaggcggttcgacggggtt
gcggaggcggtgaagttccggcgggagcgggccggaaagcagatgggtacgctcggatcg
ggcaatcattttgtcgagatttgcacggatgtgaccggttctgtgtggctcatgctccac
tccggctcccgcaacatcggcaaggaacttgccgagcatcacatcggcatcgcccggaaa
ctcccgcacaaccaaggtctgatcgaccgcgacctcgcggtgttcgtcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagtacaaccgc
accctcatgatggcgctcctgaaggacgtggtccgcaaggagttcaagaaggcgaagccg
gccttcgagccggagatcagcgcgcaccacaactacgtggccgaggagcggtacgacggc
attgacctgctggtgacccgcaagggcgcgatccgcgcgggttccggggactacgggatc
atcccgggttccatgggcacgggttcgtacatcgtcaagggcctcggaaacgccaagtcc
ttcaactccgcctcccacggcgccggtaggcgcatgagccggaacgcggccaagcggcgc
ttctcgaccaaggacctggaggagcagacacggggcgtcgagtgtcgcaaggactcgggc
gtcgtggacgagattccgggcgcttacaagccgatcgagcaggtcatcgaccagcagcgc
gacctggtcgaggtcgtggcgaagttgaagcaggtcgtctgcgtgaagggctga
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