Streptomyces pactum: B1H29_20890
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Entry
B1H29_20890 CDS
T07142
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spac03016
]
B1H29_20890
Enzymes [BR:
spac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B1H29_20890
Transfer RNA biogenesis [BR:
spac03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B1H29_20890
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
aGPT-Pplase3
Motif
Other DBs
NCBI-ProteinID:
AQS69038
UniProt:
A0A1S6JBB3
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All DBs
Position
4894027..4894623
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AA seq
198 aa
AA seq
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MRLFAAVLPPEDVTAALAAEVAALRKLPGAERLRWTGRPGRPRGGAADWHFTLAFYGEVD
DDLVPDLSARLERAAHRSAPFGLALRGGGQFGHGRALWAGAEGDLAALRLLADRAESAGR
KAGVEMGGHRRYKPHLTVARSRAAYDVRPYVEALDGFTSPAWTVTHLALVRSDLPRSGVP
GEQPRYETVARSPLGASG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttcgccgccgtactgccccccgaggacgtcaccgccgccctcgccgccgag
gtggcagcgctgcggaagctgcccggcgcggagaggctgcgctggaccggccgccccggc
cggccccgcggcggagccgctgactggcacttcacgctcgccttctacggcgaggtggac
gacgacctcgtaccggacctgtcggcccgcctggagcgggcggcccaccggagcgcgccc
ttcgggctggcgttgcgcgggggcggccagttcgggcacgggcgggcgctgtgggcgggc
gcggagggtgatctcgcggccctgcggctgctggccgaccgcgcggagtcggcggggcgc
aaggcgggcgtcgagatgggcgggcaccggcggtacaagcctcacctgacggtggcccgc
agccgggcggcctacgacgtccggccctacgtcgaagccctggacggcttcaccagcccc
gcctggaccgtgacgcacctggccctggtgcgcagcgacctgccgaggtccggggtgccg
ggcgagcagccccgttacgagacggtcgcccgcagcccgctgggcgcgtccggttag
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