KEGG   Streptomyces pactum: B1H29_22170
Entry
B1H29_22170       CDS       T07142                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
spac  Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:spac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spac03021]
    B1H29_22170
Transcription machinery [BR:spac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B1H29_22170
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 Sigma70_ECF HTH_Crp_2 MarR_2 HTH_24 HTH_3 MarR DUF7343 GerE HTH_31 HTH_28 Apolipoprotein KORA
Other DBs
NCBI-ProteinID: AQS72155
UniProt: A0A1S6JK71
LinkDB
Position
complement(5183611..5184525)
AA seq 304 aa
MSPRLDGSRTQEATSTLPPEHLDPIEHLDAVVDHDGALAGLPVIPAYDEVAPADARALSK
TLFERLESLEEGTHEHAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAI
DRFEMSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDR
APTVSELAEHLSLSKDEVVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGI
EYVESLKPLIAELPSRDRKILSLRFVAGMTQSEIGEELGISQMHVSRLLSRTLVRLRKGL
TVEE
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtcaccccggctcgacggatcgcgtacccaagaagcgacgtcgacactccctccggaa
catctggatcccatcgagcaccttgacgcggtcgtcgaccacgacggcgcactcgccggg
cttccggtcatccccgcctacgacgaggtcgctccggcggacgcccgcgcgctgtccaag
accctcttcgagcggctcgagtcgctggaggaaggcacccacgagcacgcgtacgtgcgc
aacacgctcgtcgagctcaacctcgccctggtcaagttcgccgcctcccgcttccgctcc
cgcagcgagccgatggaggacatcatccaggtcggcacgatcggcctgatcaaggcgatc
gaccgcttcgagatgtcgcgcggcgtggagttccccacgttcgcgatgccgaccatcatc
ggcgagatcaagcgcttcttccgtgacacctcgtggtccgtgcgcgtcccgcgccgcctg
caggagctgcggctcgacctggccaaggccggcgacgagctggcccagcgcctcgaccgc
gcccccacggtgagcgaactggccgagcatctgagcctgtccaaggacgaggtcgtcgag
ggcatggcggcgtccaacgcctacaccgcctcctcgctggacgcccagccggaggaggac
gacgcggagggcgcgctggccgaccgcatcggctacgaggaccacgggctcgagggcatc
gagtacgtcgagtcgctgaagccgctgatcgccgaactcccctcccgggaccgcaagatc
ctctcgctgcgcttcgtcgcgggcatgacccagtcggagatcggcgaggaactcggcatc
tcccagatgcacgtctcgcgcctgctgtcgcggacactcgtacggctgcgcaaggggctc
acggtcgaggagtga

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