Streptomyces pactum: B1H29_22170
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Entry
B1H29_22170 CDS
T07142
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spac
Streptomyces pactum
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spac03021
]
B1H29_22170
Transcription machinery [BR:
spac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H29_22170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Crp_2
MarR_2
HTH_24
HTH_3
MarR
DUF7343
GerE
HTH_31
HTH_28
Apolipoprotein
KORA
Motif
Other DBs
NCBI-ProteinID:
AQS72155
UniProt:
A0A1S6JK71
LinkDB
All DBs
Position
complement(5183611..5184525)
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AA seq
304 aa
AA seq
DB search
MSPRLDGSRTQEATSTLPPEHLDPIEHLDAVVDHDGALAGLPVIPAYDEVAPADARALSK
TLFERLESLEEGTHEHAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAI
DRFEMSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDR
APTVSELAEHLSLSKDEVVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGI
EYVESLKPLIAELPSRDRKILSLRFVAGMTQSEIGEELGISQMHVSRLLSRTLVRLRKGL
TVEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacggatcgcgtacccaagaagcgacgtcgacactccctccggaa
catctggatcccatcgagcaccttgacgcggtcgtcgaccacgacggcgcactcgccggg
cttccggtcatccccgcctacgacgaggtcgctccggcggacgcccgcgcgctgtccaag
accctcttcgagcggctcgagtcgctggaggaaggcacccacgagcacgcgtacgtgcgc
aacacgctcgtcgagctcaacctcgccctggtcaagttcgccgcctcccgcttccgctcc
cgcagcgagccgatggaggacatcatccaggtcggcacgatcggcctgatcaaggcgatc
gaccgcttcgagatgtcgcgcggcgtggagttccccacgttcgcgatgccgaccatcatc
ggcgagatcaagcgcttcttccgtgacacctcgtggtccgtgcgcgtcccgcgccgcctg
caggagctgcggctcgacctggccaaggccggcgacgagctggcccagcgcctcgaccgc
gcccccacggtgagcgaactggccgagcatctgagcctgtccaaggacgaggtcgtcgag
ggcatggcggcgtccaacgcctacaccgcctcctcgctggacgcccagccggaggaggac
gacgcggagggcgcgctggccgaccgcatcggctacgaggaccacgggctcgagggcatc
gagtacgtcgagtcgctgaagccgctgatcgccgaactcccctcccgggaccgcaagatc
ctctcgctgcgcttcgtcgcgggcatgacccagtcggagatcggcgaggaactcggcatc
tcccagatgcacgtctcgcgcctgctgtcgcggacactcgtacggctgcgcaaggggctc
acggtcgaggagtga
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