Streptomyces pactum: B1H29_23480
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Entry
B1H29_23480 CDS
T07142
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
spac
Streptomyces pactum
Pathway
spac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B1H29_23480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spac03019
]
B1H29_23480
03009 Ribosome biogenesis [BR:
spac03009
]
B1H29_23480
Messenger RNA biogenesis [BR:
spac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1H29_23480
Ribosome biogenesis [BR:
spac03009
]
Eukaryotic type
Pre-60S particles
RNases
B1H29_23480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AQS69457
UniProt:
A0A1S6JCH0
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All DBs
Position
complement(5487031..5487633)
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNILGEGVDIVVRPPERALETMPEVVR
QMHTASGLLAELDDGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKAIAAKHVLPAR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gcgctcatcgaggtggccgccctcgtcaccgactccgagctgaacatcctcggcgagggc
gtcgacatcgtcgtccgcccgccggagcgggccctggagacgatgccggaggtggtgcgc
cagatgcacaccgcgtccggcctgctcgccgagctcgacgacggcacgacgctggcggac
gccgaggcgcaggtcctggcgtacgtgcgcgagcacgtgaaggagcccggcaaggcaccg
ctgtgcggcaactcggtcggcaccgaccgcggcttcctgctgagggacatgccgacgctg
gaggactacctccactaccggatcgtcgacgtctcctcgatcaaggagctggcccgccgc
tggtacccgcgggcgtacttcaacagccccgagaagaacggcaaccaccgcgcgctcgcc
gacatccgcgagtccatcgccgaactgcgctactaccgggaagccgtcttcgtcccgcag
ccgggccccgactccgacaccgccaaggcgatcgccgcgaagcacgtcctgcccgcccgg
taa
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