Streptomyces pactum: B1H29_23820
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Entry
B1H29_23820 CDS
T07142
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spac
Streptomyces pactum
Pathway
spac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1H29_23820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spac03400
]
B1H29_23820
Enzymes [BR:
spac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B1H29_23820
DNA repair and recombination proteins [BR:
spac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1H29_23820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
Helicase_RecD
PIF1
NPHP3_N
AAA_16
PhoH
TraI_hel_assoc_N
nSTAND3
HTH_IclR
DEAD
AAA
ABC_tran
TrwB_AAD_bind
UvrD_C
ATPase_2
SLFN-g3_helicase
DUF87
Motif
Other DBs
NCBI-ProteinID:
AQS69514
UniProt:
A0A1S6JCL4
LinkDB
All DBs
Position
5565585..5567837
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AA seq
750 aa
AA seq
DB search
MSNQPAAAPGERRLAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPIFADRITQHFG
IDTLTVIEEEPKRLIEVPGLGPKRTKKIADAWDEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKNQPYRLASDVWGIGFLTADKIAQSVGIPHDSPDRVKAGLQYALSQATDQ
GHCYLPEEKLIADAVKLLQVDTGLVIECLGELAAEPEEGEDPGVVREKVPDPQGGDPVTA
VYLVPFHRAELALSAQLRRLLRTDEDRMPAFGDAPWDKALGWLKTRTGADLAPEQEAAVR
LALTEKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTV
HRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQL
PSVGAGEVLRDLLAPGSPVPAVRLTRVFRQAQESGVVTNAHRINAGQHPLTDGMKDFFLF
VEDETEEAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGALNGLLQQAVTPGR
PDVPEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTSLDPVDQRLTVLTDEDEE
VPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKQLVVL
VGSRKAIGQAVRTVSAGRRCTALDFRLAGS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccagcccgcggcggcccccggtgaacgccgcctcgccgtcctcgaaggcgtc
ctggagcgcatcacgtacgccaacgaggagaacggctacacggtcgcccgcgtcgacacc
ggcaggggcgccggtgacctgctgaccgtcgtcggcgcgctgctgggtgcccaggtgggg
gagtccctgcggatggagggccgctgggggtcccacccccagtacggcaagcagttccac
gtcgagaactacacgaccgtgctgcccgccacggtccagggcatccggcgctacctcggc
tccggtctggtcaagggcatcggtccgatcttcgccgaccgcatcacgcagcacttcggc
atcgacaccctgaccgtcatcgaggaggagcccaagcggctcatcgaggtccccggcctc
ggccccaagcggacgaagaagatcgccgacgcgtgggacgagcagaaggcgatcaaggag
gtcatgctcttcctccagaccgtcgaggtgtccacctccatcgccgtgcgcatctacaag
aagtacggcgacgcctcgatctccgtcgtgaagaaccagccctaccggctggcgtccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccgcac
gacagcccggaccgggtgaaggcgggtctgcagtacgcgttgtcgcaggccaccgaccag
gggcactgctacctccccgaggagaagctgatcgccgacgcggtgaagctgctccaggtg
gacaccgggctggtcatcgagtgcctcggcgagctggccgccgagccggaggagggcgag
gaccccggcgtcgtacgcgagaaggtccccgacccgcagggcggcgaccccgtcaccgcc
gtctacctggtccccttccaccgcgccgagctggcgctctccgcgcaactgcggcggctc
ctgcgtaccgacgaggaccggatgccggccttcggggacgcgccgtgggacaaggcgctg
ggctggctcaagacccgcaccggcgccgacctcgcccccgagcaggaagccgcggtcagg
ctcgcgctcaccgagaaggtcgccgtcctcaccggcgggccgggctgcggcaagtcgttc
accgtcaggtccatcgtcgagctggcccgcgcgaagaaggcgaaggtggtgctcgccgcg
ccgaccgggcgggccgccaagcgcctcgccgagctgaccggtgccgaggcctccacggtc
caccgcctgctggagctcaagcccggcggcgacgccgcctacgaccgggaccggccgctc
gacgccgacctcgtcgtggtcgacgaggcctccatgctcgatctgctcctcgccaacaag
ctggtcaaggccgttcccccgggcgcccacctgctcttcgtcggggacgtcgaccagttg
cccagcgtcggcgcgggggaggtgctgagagacctgctggcccccggcagccccgtcccc
gccgtccgcctcacccgggtcttccggcaggcccaggagtcgggggtcgtgacgaacgcg
caccggatcaacgccggtcagcacccgctcaccgacggcatgaaggacttcttcctcttc
gtcgaggacgagaccgaggaggcggggcggctcacggtggacgtcgccgcccggcgcatc
cccgcgaagttcggactcgacccgcgccgggacgtgcaggtgctcgcccccatgcaccgg
ggacccgccggcgccggcgcgctgaacgggctgctccagcaggccgtcaccccgggacgc
ccggacgtgccggagaagcggttcggcggccgggtcttccgggtcggcgacaaggtcacc
cagattcgcaacaattacgagaagggtgagaacggcgtcttcaacggcaccgtcggcgtg
gtcacctcgctcgacccggtggaccagcgcctcaccgtgctgacggacgaggacgaggag
gttccgtacgaattcgacgaactggacgaactggcccacgcctacgcggtgaccatccac
cgctcccagggcagcgagtacccggcggtggtgatccccgtgacgaccggcgcctggatg
atgctccagcggaacctgctgtacacggcggtcacccgggccaagcaactggtcgtcctc
gtcggctcccgcaaggcgatcggacaggcggtgcgcacggtctcggcaggtcggcgctgc
acggcgctcgacttccggctggcgggttcctga
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