Streptomyces pactum: B1H29_24955
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Entry
B1H29_24955 CDS
T07142
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spac
Streptomyces pactum
Pathway
spac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1H29_24955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spac03400
]
B1H29_24955
DNA repair and recombination proteins [BR:
spac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1H29_24955
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1H29_24955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AQS72219
UniProt:
A0A1S6JKG4
LinkDB
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Position
5832045..5832794
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AA seq
249 aa
AA seq
DB search
MSLFRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFSKGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGALRTLARGEHAPNLVLDAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGG
SVCADCRVPGSVVPSPQALELLGALLTGDWETADACEPRYVREGGGLVSAYLHWHLERGL
RSLRYVEKS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggtgaggcggac
cggatcatcaccttgctcacgcgcggtcacggacgcgtacgcgccgtggcgcgcggggtg
cggcggacgaagtcgaagttcggggcgcggctggagccgttctcacacgtggacgtgcag
ttcttctccaaggggagcgagctggtcgggcgcgggctgccgctgtgcacgcagagcgag
accatcgcgccctacggtggcgggatcgtgacggactacgcgcggtacaccgccgggacg
gccatgctggagacggccgagcggttcaccgaccacgagggcgagccggcggtgcagcag
tacctgctgctggtgggcgcgctgcggaccctcgcccggggcgagcacgcgccgaacctc
gtgctggacgcgttcctgctgcgctccctcgccgtgaacgggtacgccccgaccttcggg
gactgcgcgaagtgcgggatgcccggcccgaaccggttcttctcggtcggctcgggcggc
tccgtctgcgccgactgccgggtgcccggcagcgtcgtaccctcgccacaggccctggaa
ctgctcggggcgctgctcacgggagactgggagaccgcggacgcgtgcgagccgcggtac
gtacgggagggcggcgggctggtgtccgcgtacctccactggcatctggagcgcggcctg
cgctccttgcgatacgtcgagaaatcctga
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