Streptomyces pactum: B1H29_28060
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Entry
B1H29_28060 CDS
T07142
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spac
Streptomyces pactum
Pathway
spac00040
Pentose and glucuronate interconversions
spac01100
Metabolic pathways
spac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B1H29_28060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1H29_28060
Enzymes [BR:
spac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B1H29_28060
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AQS70228
UniProt:
A0A1S6JEP9
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All DBs
Position
6536677..6538011
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AA seq
444 aa
AA seq
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MSTSRWHGHAIKRTAALVGCTALVLSLTAATAQARPGHHHPRDTARQTLPANDGWASHGT
GTTGGAAAAEERVFTVSTWAEFKAALAAEGTAPRIIKVKGTIDAVSEGCGTFAVPGYDFD
AYLERYSPENWGRETDLSDEPDDSPEGLRRASAARQDGAIKANVPADTTIIGVGRNAGLK
GASLQIKGVDNVIVRNLTFESPVDCFPQWDPTDGDKGNWNSEYDSAVVYGSTHVWLDHNT
FTDGEHPDSAAPTHFGMLYQQHDGQLDIVKGADYVTASWNVFTEHDKTILIGNSDSESTA
AVDRGHLKTTFHHNRFEDLVERAPRVRFGQVDVYNNHFVAGEDYSYSFGIGKESQLVAEH
NAFTLPDGVSPAKVLKRWNDSPLTAAHNRVNGRAADLIAAHNAENPDTPLRSGAGWTPTL
RTKVLPAWAVPFIVDHGAGAGRLR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcgagatggcatgggcatgccataaagagaaccgccgcgctcgtcggctgc
accgccctcgtactgagcctgaccgcggccaccgcgcaggcccgtcccggtcaccaccac
ccccgcgacaccgcccggcagaccctgccggccaacgacggctgggcctcccacggcacc
ggcaccaccggcggggccgcggccgccgaggagcgggtgttcaccgtctccacctgggcc
gagttcaaggccgccctcgcggcggagggcaccgcgccgcggatcatcaaggtgaagggc
acgatcgacgccgtctccgagggctgcggaaccttcgccgtccccggctacgacttcgac
gcgtacctggagaggtactcgcccgagaactggggcagggagaccgacctgagcgacgag
cccgacgacagcccggaggggctgcgccgcgcctccgccgcccggcaggacggggcgatc
aaggcgaacgtccccgccgacaccaccatcatcggcgtcgggcgcaacgccgggctcaag
ggcgccagcctccagatcaagggcgtggacaacgtcatcgtccgcaacctgaccttcgag
agccccgtggactgcttcccgcagtgggaccccaccgacggcgacaagggcaactggaac
tccgagtacgacagcgccgtcgtgtacgggtcgacgcacgtgtggctggaccacaacacc
ttcaccgacggcgagcaccccgacagcgcggcacccacccacttcggcatgctgtaccag
cagcacgacggccagctcgacatcgtcaagggtgccgactacgtcaccgcctcctggaac
gtcttcaccgagcacgacaagacgatcctgatcggcaacagcgacagcgagtcgaccgcc
gcggtcgaccgcggccacctgaagacgaccttccaccacaaccgcttcgaggacctggtc
gagcgggcgccccgggtgcggttcggccaggtcgacgtctacaacaaccacttcgtggcc
ggcgaggactactcctacagcttcggcatcggcaaggagtcccagctcgtcgccgagcac
aacgcgttcaccctgccggacggcgtcagccccgcgaaggtgctgaagcggtggaacgac
tcgccgctcaccgccgcccacaaccgcgtcaacggccgcgccgccgacctgatcgccgcg
cacaacgcggagaacccggacacgcccctgcggtccggcgcgggctggacgcccaccctg
cgcaccaaggtcctcccggcctgggcggttcccttcatcgtcgaccacggcgcgggcgcc
ggccgcctgcgctga
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